Pre_GI: BLASTP Hits

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Query: NC_012808:3972983:3985537 Methylobacterium extorquens AM1, complete genome

Start: 3985537, End: 3986355, Length: 819

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010162:5129270:513242951324295133382954Sorangium cellulosum 'So ce 56', complete genomeshort chain dehydrogenase6e-26117
NC_013595:3712257:371225737122573713153897Streptosporangium roseum DSM 43021, complete genomeshort chain dehydrogenase8e-25114
NC_013946:305364:306403306403307317915Meiothermus ruber DSM 1279 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR9e-23107
NC_009380:2310000:2318023231802323196751653Salinispora tropica CNB-440 chromosome, complete genomeglucose/ribitol dehydrogenase2e-1893.2
NC_009380:4702815:470380447038044704718915Salinispora tropica CNB-440 chromosome, complete genomeshort chain dehydrogenase4e-1892
NC_003888:6470909:649046264904626491442981Streptomyces coelicolor A3(2), complete genomeshort chain dehydrogenase2e-1790.1
NC_007511:1681764:169728416972841698150867Burkholderia sp. 383 chromosome 2, complete sequenceShort-chain dehydrogenase/reductase SDR7e-1477.8
NC_016947:70210:905649056491409846Mycobacterium intracellulare MOTT-02 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR8e-1064.3