Pre_GI: BLASTP Hits

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Query: NC_012667:931390:960073 Vibrio cholerae MJ-1236 chromosome 2, complete genome

Start: 960073, End: 960375, Length: 303

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016945:370471:425691425691425993303Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein3e-52203
NC_016446:119914:126413126413126715303Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein3e-52203
NC_012583:440420:454101454101454403303Vibrio cholerae O395 chromosome chromosome II, complete sequencePlasmid stabilization system protein3e-52203
NC_009456:787322:809539809539809841303Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein3e-52203
NC_002506:370629:425872425872426174303Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein3e-52203
NC_017269:303500:322905322905323207303Vibrio cholerae LMA3984-4 chromosome II, complete sequenceDeath on curing protein, Doc toxin8e-52201
NC_012583:361241:395671395671395973303Vibrio cholerae O395 chromosome chromosome II, complete sequencePlasmid stabilization system protein3e-49193
NC_009456:787322:867969867969868271303Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein3e-49193
NC_013456:1819421:182710718271071827409303Vibrio sp. Ex25 chromosome 1, complete genomeplasmid stabilization system protein2e-42171
NC_004459:2443000:247530524753052475607303Vibrio vulnificus CMCP6 chromosome I, complete sequencePlasmid stabilization system protein4e-42169
NC_004459:2443000:245091924509192451221303Vibrio vulnificus CMCP6 chromosome I, complete sequencePlasmid stabilization system protein4e-42169
NC_012691:3126500:312659931265993126901303Tolumonas auensis DSM 9187, complete genomeplasmid stabilization system5e-39159
NC_010995:4460413:446531244653124465614303Cellvibrio japonicus Ueda107, complete genomePlasmid stabilization system protein3e-29127
NC_014836:2620871:263557626355762635887312Desulfurispirillum indicum S5 chromosome, complete genomeplasmid stabilization system1e-21101
NC_016010:65949:696166961669897282Xanthomonas axonopodis pv. citrumelo F1 chromosome, completehypothetical protein3e-1580.5
NC_007508:64955:700827008270363282Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein1e-1478.2
NC_004459:2443000:258686225868622587149288Vibrio vulnificus CMCP6 chromosome I, complete sequencePlasmid stabilization system protein2e-1477.8
NC_014965:1428902:147473114747311475018288Vibrio vulnificus MO6-24/O chromosome I, complete sequencedeath on curing protein, Doc toxin2e-1477.4
NC_009456:787322:873866873866874153288Vibrio cholerae O395 chromosome 1, complete sequenceplasmid stabilization system protein2e-1477.4
NC_012583:361241:389789389789390076288Vibrio cholerae O395 chromosome chromosome II, complete sequencePlasmid stabilization system protein2e-1477.4
NC_016945:370471:387761387761388120360Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein1e-1375.1
NC_002506:370629:387942387942388301360Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein1e-1375.1
NC_013959:1195249:120665412066541206986333Sideroxydans lithotrophicus ES-1 chromosome, complete genomeplasmid stabilization system8e-1372.4
NC_009483:4015777:402062840206284020927300Geobacter uraniireducens Rf4 chromosome, complete genomeplasmid stabilization system protein4e-1270.1
NC_012918:4648220:465194346519434652236294Geobacter sp. M21 chromosome, complete genomeRelE/StbE family addiction module toxin5e-1269.7
NC_010717:129500:148570148570148941372Xanthomonas oryzae pv. oryzae PXO99A, complete genomeplasmid stabilization system protein, RelE/ParE family8e-1269.3
NC_014364:3707311:373029937302993730622324Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeplasmid stabilization system5e-1166.2
NC_019902:3644000:364972236497223650018297Thioalkalivibrio nitratireducens DSM 14787, complete genomeDeath on curing protein, Doc toxin1e-0961.6
NC_014355:665000:677636677636677923288Candidatus Nitrospira defluvii, complete genomeplasmid stabilization system protein2e-0961.2
NC_014935:1834569:184410518441051844434330Nitratifractor saLSUginis DSM 16511 chromosome, complete genomeplasmid stabilization system2e-0960.8
NC_021184:3149000:316080531608053161080276Desulfotomaculum gibsoniae DSM 7213, complete genomeplasmid stabilization system protein2e-0858.2
NC_008609:2840249:285220128522012852500300Pelobacter propionicus DSM 2379, complete genomeplasmid stabilization system6e-0753.1
NC_011830:3528665:353388035338803534203324Desulfitobacterium hafniense DCB-2, complete genomeaddiction module toxin, RelE/StbE family7e-0752.8
NC_015672:1921023:195584119558411956164324Flexistipes sinusarabici DSM 4947 chromosome, complete genomeRelE/StbE family addiction module toxin5e-0649.7