Pre_GI: BLASTP Hits

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Query: NC_012660:5793200:5811142 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 5811142, End: 5811780, Length: 639

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013406:5066769:508499650849965085649654Paenibacillus sp. Y412MC10 chromosome, complete genomeTetR family transcriptional regulator1e-1066.6
NC_008600:2353696:236310023631002363594495Bacillus thuringiensis str. Al Hakam, complete genometranscriptional regulator, TetR family2e-1065.9
NC_014335:2274774:227990022799002280316417Bacillus cereus biovar anthracis str. CI chromosome, completeTetR family transcriptional regulator3e-1065.5
NC_009848:3582384:359831935983193598969651Bacillus pumilus SAFR-032, complete genomeTetR family transcriptional regulator1e-0859.7
NC_014926:608894:628881628881629447567Thermovibrio ammonificans HB-1 chromosome, complete genometranscriptional regulator, TetR family3e-0858.5
NC_015563:3203012:321023432102343210932699Delftia sp. Cs1-4 chromosome, complete genomeTetR family transcriptional regulator2e-0756.2
NC_013174:2712000:272988427298842730546663Jonesia denitrificans DSM 20603, complete genometranscriptional regulator, TetR family2e-0755.8
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome3e-0755.5
NC_000911:2747604:276317027631702763733564Synechocystis sp. PCC 6803, complete genomehypothetical protein3e-0755.1
NC_017039:2745432:276099827609982761561564Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein3e-0755.1
NC_017052:2745420:276098627609862761549564Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein3e-0755.1
NC_017277:2746421:276198727619872762550564Synechocystis sp. PCC 6803, complete genomehypothetical protein3e-0755.1
NC_020126:8984500:898633789863378987062726Myxococcus stipitatus DSM 14675, complete genomeTetR family transcriptional regulator3e-0755.1
NC_016027:346768:353003353003353650648Gluconacetobacter xylinus NBRC 3288, complete genometranscriptional regulator5e-0754.7
NC_015578:3266855:327350432735043274073570Treponema primitia ZAS-2 chromosome, complete genomeThlR, HTH transcriptional regulator TetR/AcrR family5e-0754.3
NC_008269:868000:873325873325873912588Rhodococcus sp. RHA1 plasmid pRHL1, complete sequencetranscriptional regulator, TetR family8e-0753.9
NC_015589:3340500:335968733596873360313627Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeregulatory protein TetR8e-0753.9
NC_015125:788931:793293793293793889597Microbacterium testaceum StLB037, complete genometranscriptional regulator7e-0753.9
NC_010162:7824878:782765278276527828311660Sorangium cellulosum 'So ce 56', complete genomeHTH-type transcriptional regulator betI1e-0653.5
NC_004193:375416:552830552830553441612Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator2e-0652.8
NC_017033:1939507:195994219599421960556615Frateuria aurantia DSM 6220 chromosome, complete genometranscriptional regulator2e-0652.8
NC_015738:1971211:198791219879121988565654Eggerthella sp. YY7918, complete genomehypothetical protein2e-0652.8
NC_021177:2185898:220127722012772201948672Streptomyces fulvissimus DSM 40593, complete genomeTetR-family transcriptional regulator2e-0652.4
NC_008595:2687245:2687743268774326890831341Mycobacterium avium 104, complete genomeputative transcriptional regulator2e-0652.4
NC_002947:2809591:282171928217192822312594Pseudomonas putida KT2440, complete genometranscriptional regulator, TetR family2e-0652.4
NC_008269:868000:876378876378876992615Rhodococcus sp. RHA1 plasmid pRHL1, complete sequencetranscriptional regulator, TetR family3e-0652
UCMB5137:2054735:209490420949042095476573Bacillus atrophaeus UCMB-5137transcriptional regulator4e-0651.6
NC_016948:2931285:2979810297981029811501341Mycobacterium intracellulare MOTT-64 chromosome, complete genometranscriptional regulator6e-0650.8
NC_011666:1572487:157707315770731577708636Methylocella silvestris BL2, complete genometranscriptional regulator, TetR family8e-0650.4
NC_017904:1763015:176766117676611768308648Mycobacterium sp. MOTT36Y chromosome, complete genomeTetR family transcriptional regulator9e-0650.4
NC_013205:854983:879742879742880350609Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transcriptional regulator, TetR family1e-0550.1
NC_010612:6113155:612666161266616127263603Mycobacterium marinum M, complete genometranscriptional regulatory protein (probably TetR-family)1e-0550.1
NC_006361:3132000:314393831439383144471534Nocardia farcinica IFM 10152, complete genomeputative transcriptional regulator1e-0550.1