Pre_GI: BLASTP Hits

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Query: NC_012660:3689223:3704136 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 3704136, End: 3704810, Length: 675

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017047:1434500:145005714500571450734678Rahnella aquatilis HX2 chromosome, complete genomeanti-sigma K factor RskA3e-2098.6
NC_015061:1481500:149711414971141497791678Rahnella sp. Y9602 chromosome, complete genomeAnti-sigma K factor RskA3e-2098.6
NC_010678:642769:663476663476664207732Ralstonia pickettii 12J chromosome 2, complete sequencehypothetical protein8e-1994
NC_007509:71954:729207292073654735Burkholderia sp. 383 chromosome 3, complete sequencehypothetical protein1e-1892.8
NC_013446:2237854:225243122524312253231801Comamonas testosteroni CNB-2, complete genomeRNA polymerase sigma-70 family protein2e-1582.4
NC_014311:1106871:112201511220151122734720Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein1e-1376.6
NC_014931:1642179:165033416503341651101768Variovorax paradoxus EPS chromosome, complete genomeAnti-sigma K factor RskA4e-1375.1
NC_015563:3401867:340677034067703407516747Delftia sp. Cs1-4 chromosome, complete genomeAnti-sigma-K factor RskA6e-1064.3
NC_010002:4175809:418922841892284189974747Delftia acidovorans SPH-1, complete genomeRNA polymerase sigma-70 family protein3e-0962.4
NC_017986:5467279:548668354866835487375693Pseudomonas putida ND6 chromosome, complete genomehypothetical protein2e-0858.9