Pre_GI: BLASTP Hits

Some Help

Query: NC_012660:3320330:3343204 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 3343204, End: 3344286, Length: 1083

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011283:4767269:4780245478024547813001056Klebsiella pneumoniae 342 chromosome, complete genomeFldA family protein4e-130464
NC_013850:4612812:4625788462578846268431056Klebsiella variicola At-22 chromosome, complete genomeprotein of unknown function DUF4535e-129461
NC_013716:3327881:3330688333068833317701083Citrobacter rodentium ICC168, complete genomehypothetical protein9e-91333
NC_008313:2629281:2633871263387126359102040Ralstonia eutropha H16 chromosome 1, complete sequencetwo domain protein: PF04304 and PF034012e-90332
NC_009512:1518113:1528950152895015300411092Pseudomonas putida F1, complete genomeprotein of unknown function DUF4532e-86319
NC_014817:29795:3296232962340501089Asticcacaulis excentricus CB 48 chromosome 2, complete sequencehypothetical protein6e-86318
NC_009512:3618055:3620858362085836219431086Pseudomonas putida F1, complete genomeprotein of unknown function DUF4539e-85313
NC_015380:717990:7234877234877245721086Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genomehypothetical protein3e-82305
NC_009655:195500:2182022182022192721071Actinobacillus succinogenes 130Z chromosome, complete genomehypothetical protein2e-81303
NC_010718:2265447:2281260228126022823961137Natranaerobius thermophilus JW/NM-WN-LF, complete genomeprotein of unknown function DUF4531e-62240
NC_015186:2197236:2214607221460722158481242Acidiphilium multivorum AIU301, complete genomehypothetical protein7e-60231
NC_016584:432610:4495024495024506411140Desulfosporosinus orientis DSM 765 chromosome, complete genomehypothetical protein2e-59229
NC_020291:4033000:4040866404086640419751110Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative 3-methylitaconate isomerase2e-58226
NC_020272:599064:6004836004836016131131Bacillus amyloliquefaciens IT-45, complete genomehypothetical protein2e-58226
NC_015519:426948:4377774377774389311155Tepidanaerobacter sp. Re1 chromosome, complete genomePrpF protein2e-58226
NC_011740:3739395:3754760375476037559291170Escherichia fergusonii ATCC 35469, complete genomehypothetical protein1e-55217
NC_013508:2130681:2148005214800521491621158Edwardsiella tarda EIB202, complete genomehypothetical protein7e-52204
NC_015677:1282865:1284916128491612860701155Ramlibacter tataouinensis TTB310 chromosome, complete genomehypothetical protein3e-47189
NC_015380:717990:7307577307577318901134Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genomePrpF protein involved in 2-methylcitrate cycle1e-40167
NC_005966:2653945:2657701265770126588821182Acinetobacter sp. ADP1, complete genomehypothetical protein1e-39163
NC_012560:2315350:2320912232091223221051194Azotobacter vinelandii DJ, complete genomeacnD accessory protein1e-37157
NC_021150:2315362:2320924232092423221171194Azotobacter vinelandii CA6, complete genomeacnD accessory protein1e-37157
NC_016745:2161408:2164000216400021651751176Oceanimonas sp. GK1 chromosome, complete genomehypothetical protein5e-36152
NC_014394:93344:1157331157331169141182Gallionella capsiferriformans ES-2 chromosome, complete genomeAcnD-accessory protein PrpF1e-34147