Pre_GI: BLASTP Hits

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Query: NC_012660:3179980:3188248 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 3188248, End: 3189228, Length: 981

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016884:587789:5945005945005961701671Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeUBA/THIF-type NAD/FAD binding protein5e-1685.5
NC_010067:3247169:325703932570393258007969Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-1581.6
NC_016790:31240:3202532025330351011Corynebacterium diphtheriae VA01 chromosome, complete genomethiamine biosynthesis protein2e-1170.1
NC_017219:2372000:2381855238185523829251071Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein2e-1067
NC_011593:2372362:2382037238203723831071071Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,UBA/THIF-type NAD/FAD binding protein2e-1067
NC_009674:1707944:1729665172966517307801116Bacillus cytotoxicus NVH 391-98 chromosome, complete genomeUBA/THIF-type NAD/FAD binding protein3e-1066.6
NC_014206:345499:3709523709523723551404Geobacillus sp. C56-T3 chromosome, complete genomeUBA/THIF-type NAD/FAD binding protein4e-1065.9
NC_013715:1907503:1914862191486219159171056Rothia mucilaginosa DY-18, complete genomedinucleotide-utilizing enzyme6e-1065.5
NC_011134:1951682:1962324196232419633881065Streptococcus equi subsp. zooepidemicus str. MGCS10565, completeHesA/MoeB/ThiF family protein2e-0963.9
NC_014221:3068222:308040930804093081206798Truepera radiovictrix DSM 17093 chromosome, complete genomeUBA/THIF-type NAD/FAD binding protein1e-0861.2
NC_009012:3653111:367095336709533671717765Clostridium thermocellum ATCC 27405, complete genomeUBA/THIF-type NAD/FAD binding fold2e-0860.5
NC_012526:4462:235402354024280741Deinococcus deserti VCD115, complete genomeputative DNA-binding protein HU Histone-like protein2e-0860.1
NC_014551:1872000:1889166188916618910041839Bacillus amyloliquefaciens DSM 7, complete genomethiamine/molybdopterin biosynthesis ThiF/MoeB-like protein2e-0860.1
NC_012912:4428111:4441335444133544424291095Dickeya zeae Ech1591, complete genomeUBA/THIF-type NAD/FAD binding protein4e-0859.3
NC_011832:1148859:117121311712131172013801Candidatus Methanosphaerula palustris E1-9c, complete genomeUBA/THIF-type NAD/FAD binding protein3e-0756.2
NC_017278:1873934:187393418739341874743810Thermus sp. CCB_US3_UF1 chromosome, complete genomehypothetical protein7e-0755.1
NC_014166:1424754:143647614364761437159684Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeUBA/THIF-type NAD/FAD binding protein1e-0654.7
NC_011134:51218:6131261312624331122Streptococcus equi subsp. zooepidemicus str. MGCS10565, completeHesA/MoeB/ThiF family protein1e-0654.3
NC_008571:505776:5217135217135227231011Gramella forsetii KT0803, complete genomemolybdenum cofactor biosynthesis protein2e-0653.9
NC_009511:5362705:537542953754295376178750Sphingomonas wittichii RW1 chromosome, complete genomeUBA/THIF-type NAD/FAD binding protein6e-0652
NC_020304:2107979:213121321312132132022810Desulfocapsa sulfexigens DSM 10523, complete genomethiamine biosynthesis protein ThiF, family 27e-0651.6