Pre_GI Gene

Some Help

Host: NC_011593 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011593:2372362 Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from human infant feces. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium longum is found in adult humans and formula fed infants as a normal component of gut flora.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
23723622373318957CHAP proteinQuickGO ontologyBLASTP
237371123748531143phosphoserine aminotransferaseQuickGO ontologyBLASTP
23749782375238261hypothetical proteinBLASTP
237524523764291185histidine kinaseQuickGO ontologyBLASTP
23766292377303675phosphate uptake regulator PhoUQuickGO ontologyBLASTP
23776622378402741phosphoglyceromutaseQuickGO ontologyBLASTP
23785562378888333exodeoxyribonuclease VQuickGO ontologyBLASTP
23789432379269327Resolvase helix-turn-helix domain-containing proteinQuickGO ontologyBLASTP
237995823810701113Cytochrome P450-like proteinQuickGO ontologyBLASTP
23810882382029942ATPase AAAQuickGO ontologyBLASTP
238203723831071071UBATHIF-type NADFAD binding proteinQuickGO ontologyBLASTP
23834972384411915hypothetical proteinBLASTP
238473323859561224major facilitator superfamily proteinQuickGO ontologyBLASTP
2386512238749898714-dihydroxy-2-naphthoate octaprenyltransferaseQuickGO ontologyBLASTP
238767323892021530lysyl-tRNA synthetaseQuickGO ontologyBLASTP
2389557238963377tRNA-ProQuickGO ontology
238985023910371188major facilitator superfamily proteinQuickGO ontologyBLASTP
239123123947703540LPXTG-motif cell wall anchor domain-containing proteinQuickGO ontologyBLASTP