Pre_GI: BLASTP Hits

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Query: NC_012660:1804610:1825085 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 1825085, End: 1826116, Length: 1032

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007951:4741620:4742254474225447433451092Burkholderia xenovorans LB400 chromosome 1, complete sequenceputative benzoate 1,2-dioxygenase alpha subunit3e-78291
NC_012724:147454:1687801687801698381059Burkholderia glumae BGR1 chromosome 1, complete genomehypothetical protein2e-72273
NC_014117:3375796:3392980339298033940951116Burkholderia sp. CCGE1002 chromosome chromosome 1, completeRieske (2Fe-2S) iron-sulfur domain protein2e-1686.7
NC_009092:1504363:1541211154121115423201110Shewanella loihica PV-4, complete genomeRieske (2Fe-2S) domain protein5e-1479
NC_014117:3375796:3383271338327133844071137Burkholderia sp. CCGE1002 chromosome chromosome 1, completeRieske (2Fe-2S) iron-sulfur domain protein6e-1478.6
NC_017271:2278500:2289754228975422908871134Xanthomonas campestris pv. raphani 756C chromosome, completering hydroxylating dioxygenase subunit alpha2e-1376.6
NC_010002:661696:6738296738296749741146Delftia acidovorans SPH-1, complete genomeRieske (2Fe-2S) domain protein8e-1271.6
NC_004129:1848701:1859840185984018609821143Pseudomonas fluorescens Pf-5, complete genomeRieske 2Fe-2S domain protein3e-1169.7
NC_015942:2316354:2327248232724823284231176Acidithiobacillus ferrivorans SS3 chromosome, complete genomeRieske (2Fe-2S) iron-sulfur domain-containing protein4e-1169.3
NC_012732:1:8287828794201134Rickettsia peacockii str. Rustic plasmid pRPR, complete sequenceputative phenylpropionate dioxygenase3e-1066.2
NC_007508:2277640:2289563228956322907021140Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative Rieske 2Fe-2S family protein2e-0963.5
NC_003911:3864852:3889522388952238906641143Silicibacter pomeroyi DSS-3, complete genomeRieske 2Fe-2S domain protein6e-0962
NC_017506:1100679:1132749113274911339931245Marinobacter adhaerens HP15 chromosome, complete genomeRieske (2Fe-2S) domain-containing protein1e-0860.8
NC_015381:1705383:1705383170538317066601278Burkholderia gladioli BSR3 chromosome 1, complete sequenceBenzoate 1,2-dioxygenase subunit alpha2e-0860.5
NC_013947:5546315:5555951555595155571231173Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeRieske (2Fe-2S) domain-containing protein7e-0858.5
NC_016642:2573481:2575118257511825762571140Pseudovibrio sp. FO-BEG1 chromosome, complete genomeRieske 2Fe-2S family protein8e-0858.2
NC_011666:1572487:1588235158823515894761242Methylocella silvestris BL2, complete genomeRieske (2Fe-2S) domain protein8e-0858.2
NC_013769:826933:8340608340608353761317Sulfolobus islandicus L.D.8.5 chromosome, complete genomeRieske (2Fe-2S) domain-containing protein1e-0757.4
NC_018697:505915:5116715116715130321362Cycloclasticus sp. P1 chromosome, complete genomeRing hydroxylating dioxygenase, alpha subunit: Rieske (2Fe-2S) region protein4e-0755.8
NC_016147:3023180:3038691303869130399681278Pseudoxanthomonas spadix BD-a59 chromosome, complete genomelarge terminal subunit of phenylpropionate dioxygenase5e-0755.8
NC_002947:6123608:6123608612360861247981191Pseudomonas putida KT2440, complete genomeRieske 2Fe-2S family protein7e-0755.1
NC_017275:698854:7137517137517150671317Sulfolobus islandicus HVE10/4 chromosome, complete genomeRieske (2Fe-2S) domain-containing protein8e-0755.1
NC_008752:166877:1844981844981857631266Acidovorax avenae subsp. citrulli AAC00-1, complete genomeRieske (2Fe-2S) domain protein2e-0653.9
NC_014641:20103:3865938659399211263Achromobacter xylosoxidans A8 plasmid pA81, complete sequencebiphenyl dioxygenase subunit alpha2e-0653.5
NC_009921:1668306:1706233170623317075041272Frankia sp. EAN1pec, complete genomeRieske (2Fe-2S) domain protein3e-0652.8
NC_007953:1043957:1043957104395710451201164Burkholderia xenovorans LB400 chromosome 3, complete sequencePutative Rieske-type ring dioxygenase4e-0652.4
NC_017904:4203257:4217034421703442183171284Mycobacterium sp. MOTT36Y chromosome, complete genomedioxygenase4e-0652.4
NC_015675:6493444:6517609651760965187121104Mesorhizobium opportunistum WSM2075 chromosome, complete genomeRieske (2Fe-2S) iron-sulfur domain-containing protein4e-0652.4
NC_019973:5869500:5891898589189858930011104Mesorhizobium australicum WSM2073, complete genomering-hydroxylating dioxygenase, large terminal subunit4e-0652.4
NC_014923:5940500:5962938596293859640411104Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeRieske (2Fe-2S) iron-sulfur domain4e-0652.4
NC_013757:3012130:3022635302263530238461212Geodermatophilus obscurus DSM 43160, complete genomeRieske (2Fe-2S) iron-sulphur domain protein5e-0652.4
NC_007492:3384077:3404926340492634062841359Pseudomonas fluorescens PfO-1, complete genomering hydroxylating dioxygenase, alpha subunit8e-0651.6