Pre_GI: BLASTP Hits

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Query: NC_012660:1804610:1814776 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 1814776, End: 1815954, Length: 1179

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008781:3688965:3701180370118037024541275Polaromonas naphthalenivorans CJ2, complete genomepolysaccharide biosynthesis protein2e-97356
NC_015458:3328905:3330189333018933314631275Pusillimonas sp. T7-7 chromosome, complete genomepolysaccharide biosynthesis protein2e-87323
NC_014207:1366766:1376507137650713779671461Methylotenera sp. 301 chromosome, complete genomepolysaccharide biosynthesis protein1e-64246
NC_015856:940625:9489449489449502841341Collimonas fungivorans Ter331 chromosome, complete genomeO-antigen and teichoic acid export membrane protein7e-63241
NC_012691:3126500:3140943314094331422141272Tolumonas auensis DSM 9187, complete genomepolysaccharide biosynthesis protein8e-53207
NC_004337:2098736:2113946211394621152021257Shigella flexneri 2a str. 301, complete genomepolysaccharide biosynthesis protein4e-48192
NC_004741:2081649:2096813209681320980691257Shigella flexneri 2a str. 2457T, complete genomepolysaccharide biosynthesis protein4e-48192
NC_017328:2153083:2168247216824721695031257Shigella flexneri 2002017 chromosome, complete genomeputative O-antigen transporter4e-48192
NC_008258:2100646:2115811211581121170671257Shigella flexneri 5 str. 8401, complete genomepolysaccharide biosynthesis protein7e-48191
NC_007348:2115152:2121475212147521227431269Ralstonia eutropha JMP134 chromosome 2, complete sequencePolysaccharide biosynthesis protein7e-46184
NC_008027:1559083:1571917157191715734161500Pseudomonas entomophila L48, complete genomepolysaccharide biosynthesis protein involved O-antigen biosynthesis protein1e-45184
NC_007973:2952004:2966585296658529678441260Ralstonia metallidurans CH34 chromosome 1, complete sequencepolysaccharide biosynthesis protein4e-44179
NC_007946:2231872:2245400224540022466471248Escherichia coli UTI89, complete genomeputative O-antigen transporter1e-42174
NC_011761:1155636:1161287116128711627531467Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completepolysaccharide biosynthesis protein2e-41170
NC_007958:830000:8414348414348428401407Rhodopseudomonas palustris BisB5, complete genomepolysaccharide biosynthesis protein2e-41170
NC_015850:761500:7692867692867718532568Acidithiobacillus caldus SM-1 chromosome, complete genomepolysaccharide biosynthesis protein4e-40165
NC_015850:217495:2333392333392348891551Acidithiobacillus caldus SM-1 chromosome, complete genomepolysaccharide biosynthesis protein8e-38158
NC_016816:1676460:1690102169010216912561155Pantoea ananatis LMG 5342, complete genomeO-antigen flippase5e-31135
NC_015572:1252000:1295800129580012970711272Methylomonas methanica MC09 chromosome, complete genomepolysaccharide biosynthesis protein2e-24113
NC_004347:3303957:3319856331985633213611506Shewanella oneidensis MR-1, complete genomepolysaccharide biosynthesis domain protein6e-0858.9
NC_016935:7512884:7512884751288475144401557Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein3e-0756.6
NC_015690:7422911:7422911742291174244671557Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein3e-0756.6
NC_013959:2892660:2908881290888129103891509Sideroxydans lithotrophicus ES-1 chromosome, complete genomepolysaccharide biosynthesis protein1e-0654.3