Pre_GI: BLASTP Hits

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Query: NC_012125:3879917:3901045 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 3901045, End: 3901788, Length: 744

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:3905875:392911339291133929856744Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein8e-130462
NC_009792:4693152:470802147080214708764744Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-118425
NC_014831:1843835:186839318683931869142750Thermaerobacter marianensis DSM 12885 chromosome, complete genomeprotein of unknown function DUF13419e-51200
NC_016771:4569941:456994145699414570696756Bacillus cereus NC7401, complete genomehypothetical protein6e-49194
NC_011969:4556296:455803045580304558785756Bacillus cereus Q1 chromosome, complete genomehypothetical protein6e-49194
NC_014335:4566692:456770145677014568456756Bacillus cereus biovar anthracis str. CI chromosome, completehypothetical protein6e-49194
NC_012472:4630485:463613246361324636887756Bacillus cereus 03BB102, complete genomehypothetical protein8e-49193
NC_008600:4626464:463211446321144632869756Bacillus thuringiensis str. Al Hakam, complete genomehypothetical protein8e-49193
NC_016779:4588000:458978045897804590535756Bacillus cereus F837/76 chromosome, complete genome4-hydroxy-2-ketovalerate aldolase8e-49193
NC_014171:4681822:468283146828314683586756Bacillus thuringiensis BMB171 chromosome, complete genome4-hydroxy-2-oxoglutarate aldolase2e-48192
NC_017200:4632000:464041146404114641166756Bacillus thuringiensis serovar finitimus YBT-020 chromosome,hypothetical protein1e-47189
NC_011772:4763542:476985047698504770605756Bacillus cereus G9842, complete genomehypothetical protein1e-47189
NC_004722:4767294:476729447672944768049756Bacillus cereus ATCC 14579, complete genome4-Hydroxy-2-oxoglutarate aldolase2e-47189
NC_004193:3325612:333355833335583334298741Oceanobacillus iheyensis HTE831, complete genomehypothetical protein2e-42172
NC_013411:2975364:298243629824362983164729Geobacillus sp. Y412MC61, complete genomehypothetical protein6e-23107
NC_014915:2092678:212236721223672123095729Geobacillus sp. Y412MC52 chromosome, complete genomeprotein of unknown function DUF13416e-23107