Pre_GI: BLASTP Hits

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Query: NC_012125:1360593:1385677 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 1385677, End: 1386501, Length: 825

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014618:1452927:147370014737001474524825Enterobacter cloacae SCF1 chromosome, complete genomepeptidase U6 penicillin-insensitive murein endopeptidase7e-115413
NC_016513:1859767:187547418754741876346873Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completepenicillin-insensitive murein endopeptidase5e-67254
NC_013416:1526920:154032415403241541196873Aggregatibacter actinomycetemcomitans D11S-1, complete genomepeptidoglycan amidase MepA5e-67254
NC_006370:768745:788715788715789551837Photobacterium profundum SS9 chromosome 1, complete sequencepenicillin-insensitive murein endopeptidase1e-66253
NC_010506:774455:788475788475789311837Shewanella woodyi ATCC 51908, complete genomepeptidase U6 penicillin-insensitive murein endopeptidase1e-56219
NC_010334:722408:729845729845730741897Shewanella halifaxensis HAW-EB4, complete genomepeptidase U6 penicillin-insensitive murein endopeptidase6e-52204