Pre_GI: BLASTP Hits

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Query: NC_012125:1330066:1354272 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 1354272, End: 1354784, Length: 513

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011083:374000:394535394535395221687Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,gp796e-97352
NC_007712:3067000:309105230910523091792741Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein2e-81301
NC_007712:2806500:284443028444302845170741Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein2e-81301
NC_012751:409333:412026412026412712687Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completehypothetical protein1e-63241
NC_015428:21724:269592695927657699Lactobacillus buchneri NRRL B-30929 chromosome, complete genomephage regulatory protein, Rha-like protein5e-1684
NC_007712:532500:5400895400895411561068Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein2e-1478.2
NC_016077:1388775:138877513887751389437663Acidaminococcus intestini RyC-MR95 chromosome, complete genomephage regulatory protein rha4e-1477.4
NC_009633:4097536:413600141360014136663663Alkaliphilus metalliredigens QYMF chromosome, complete genomeRha family phage regulatory protein6e-1270.1
NC_010337:2848360:288696328869632887631669Heliobacterium modesticaldum Ice1, complete genomehypothetical protein1e-1169.3
NC_018704:1424728:143131814313181432010693Amphibacillus xylanus NBRC 15112, complete genomehypothetical protein2e-1168.6
NC_014251:243700:258773258773259378606Streptococcus pneumoniae TCH8431/19A chromosome, complete genomephage protein5e-1167
NC_015519:2526047:253269625326962533364669Tepidanaerobacter sp. Re1 chromosome, complete genomephage regulatory protein, Rha family6e-1167
NC_014251:440875:444346444346444972627Streptococcus pneumoniae TCH8431/19A chromosome, complete genomephage protein7e-1063.2
NC_010380:254088:258125258125258751627Streptococcus pneumoniae Hungary19A-6, complete genomehypothetical protein7e-1063.2
NC_012469:198096:202134202134202760627Streptococcus pneumoniae Taiwan19F-14, complete genomehypothetical protein7e-1063.2
NC_014500:2019113:204403520440352044832798Dickeya dadantii 3937 chromosome, complete genomehypothetical protein7e-1063.2
NC_013592:2703327:270488327048832705725843Dickeya dadantii Ech586, complete genomeAntA/AntB antirepressor domain protein1e-0962.4
NC_015875:190041:193886193886194515630Streptococcus pseudopneumoniae IS7493 chromosome, complete genomehypothetical protein2e-0858.5
NC_010694:2716348:273740927374092738245837Erwinia tasmaniensis, complete genomePutative phage anti-repressor protein3e-0857.8
NC_015433:1998427:200775320077532008379627Streptococcus suis ST3 chromosome, complete genomehypothetical protein3e-0857.8
NC_021184:1024305:103167710316771032495819Desulfotomaculum gibsoniae DSM 7213, complete genomeKilA-N domain-containing protein5e-0857
NC_009089:478328:495221495221496039819Clostridium difficile 630, complete genomehypothetical protein8e-0856.6
NC_013316:2033906:209749720974972098300804Clostridium difficile R20291, complete genomehypothetical protein7e-0856.6
NC_013515:715009:726557726557727360804Streptobacillus moniliformis DSM 12112, complete genomeKilA domain protein7e-0856.6
NC_011748:299080:299080299080299880801Escherichia coli 55989, complete genomeAntA/AntB antirepressor6e-0856.6
CU928145:299080:299080299080299880801Escherichia coli 55989 chromosome, complete genomeAntA/AntB antirepressor6e-0856.6
NC_014922:1360000:136630413663041367077774Haemophilus influenzae F3047 chromosome, complete genomeanti-repressor protein9e-0856.2
NC_002663:1988000:200009120000912000810720Pasteurella multocida subsp. multocida str. Pm70, complete genomehypothetical protein2e-0755.5
NC_011745:3245000:326114132611413261878738Escherichia coli ED1a chromosome, complete genomehypothetical protein3e-0754.7
NC_015566:4350080:437655643765564377395840Serratia sp. AS12 chromosome, complete genomeAntA/AntB antirepressor domain-containing protein4e-0753.9
NC_013853:2048867:206409720640972064723627Streptococcus mitis B6, complete genomehypothetical protein7e-0753.5
NC_015558:1485762:148992914899291490546618Streptococcus parauberis KCTC 11537 chromosome, complete genomehypothetical protein1e-0652.4
NC_015759:1117122:113132411313241131938615Weissella koreensis KACC 15510 chromosome, complete genomehypothetical protein3e-0651.2