Pre_GI: BLASTP Hits

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Query: NC_011982:206784:221625 Agrobacterium vitis S4 plasmid pTiS4, complete sequence

Start: 221625, End: 222335, Length: 711

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003065:27163:527405274053462723Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequenceisopentenyl transferase1e-61236
NC_003308:1:193371933720059723Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequenceisopentenyl transferase1e-61236
NC_013722:3022236:304352030435203044236717Xanthomonas albilineans, complete genomeprobable isopentenyl transferase protein1e-55216
NC_003308:1:102881028810482195Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequenceisopentyladenosine phosphotransferase2e-1375.9
NC_003065:27163:436914369143885195Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence2e-1375.9
NC_007514:1840971:185696018569601857895936Chlorobium chlorochromatii CaD3, complete genometRNA isopentenyltransferase1e-0653.5