Pre_GI: BLASTP Hits

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Query: NC_011982:206784:206784 Agrobacterium vitis S4 plasmid pTiS4, complete sequence

Start: 206784, End: 207011, Length: 228

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011982:130199:1454811454811465811101Agrobacterium vitis S4 plasmid pTiS4, complete sequencetransposase3e-26117
NC_009620:1307932:1307932130793213090201089Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequenceferuloyl esterase1e-1375.1
NC_016027:1851737:188045018804501880983534Gluconacetobacter xylinus NBRC 3288, complete genometransposase3e-1270.5
NC_016027:54305:791977919779562366Gluconacetobacter xylinus NBRC 3288, complete genometransposase4e-1270.1
NC_004463:18497:2197221972230811110Bradyrhizobium japonicum USDA 110, complete genomeputative transposase7e-1269.3
NC_017249:18493:221332213323077945Bradyrhizobium japonicum USDA 6, complete genometransposase7e-1269.3
NC_015656:454500:462653462653462862210Frankia symbiont of Datisca glomerata chromosome, complete genome2e-0754.3
NC_009255:1890112:1908471190847119095411071Burkholderia vietnamiensis G4 chromosome 2, complete sequenceputative transposase3e-0753.9
NC_008554:4586543:4604255460425546053431089Syntrophobacter fumaroxidans MPOB, complete genomeputative transposase3e-0753.9
NC_009255:1890112:189737618973761897564189Burkholderia vietnamiensis G4 chromosome 2, complete sequence4e-0753.5
NC_015656:105840:1098501098501109381089Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase4e-0753.5
NC_015656:1618329:1628835162883516299231089Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase3e-0753.5
NC_015656:2484749:2507008250700825080961089Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase3e-0753.5
NC_015656:632960:6426266426266437141089Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase3e-0753.5
NC_015656:4850833:4854067485406748551551089Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase3e-0753.5
NC_015656:1653450:1668188166818816692761089Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase3e-0753.5
NC_015656:132633:1537311537311548191089Frankia symbiont of Datisca glomerata chromosome, complete genomeputative transposase3e-0753.5
NC_009921:8648994:8662007866200786630951089Frankia sp. EAN1pec, complete genomeputative transposase7e-0752.8
NC_009921:3473854:3481826348182634829141089Frankia sp. EAN1pec, complete genomeputative transposase7e-0752.8
NC_007951:1042291:1047582104758210486521071Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase6e-0752.8
NC_009921:3255833:3263570326357032647391170Frankia sp. EAN1pec, complete genomeputative transposase8e-0752.4
NC_021177:7815791:782802778280277828764738Streptomyces fulvissimus DSM 40593, complete genomePutative transposase1e-0651.6
NC_017904:2379387:238034723803472381252906Mycobacterium sp. MOTT36Y chromosome, complete genomeISMsm2, transposase2e-0651.2
NC_008782:2781229:2781490278149027825691080Acidovorax sp. JS42, complete genomeIntegrase, catalytic region5e-0650.1