Pre_GI: BLASTP Hits

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Query: NC_011963:3073283:3074340 Rhodobacter sphaeroides KD131 chromosome 1, complete sequence

Start: 3074340, End: 3076457, Length: 2118

Host Lineage: Rhodobacter sphaeroides; Rhodobacter; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Halophilic, purple nonsulfur photosynthetic bacterium. Capable of producing high levels of biohydrogen (H2). Originally isolated from sea mud off the coast of DaeBu Island, South Korea. Bacteria belonging to the Rhodobacter group are metabolically versatile as they are able to grow using photosynthesis, chemosynthesis, and usually can grow under both anaerobic and aerobic conditions. The most extensively studied bacteria with regards to its photosynthetic capabilities which includes the structure, function and regulation of its photosynthetic membranes, its mechanisms of CO2 and nitrogen fixation, cytochrome diversity and its electron transport systems. It can grow aerobically and anaerobically in the light and anaerobically in the dark. It produces an intracytoplasmic membrane system consisting of membrane invaginations where the light harvesting complexes (LH1 and LH2) and the reaction center are synthesized. Furthermore, it has the ability to detoxify metal oxides and oxyanions and hence has a role in bioremediation.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007493:207932:2123092123092144262118Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequenceTRAP-T family transporter with fused DctQ/DctM subunits01099
NC_020829:940692:9700529700529720792028Pseudomonas denitrificans ATCC 13867, complete genometransporter2e-171603
NC_014633:837588:8505938505938525841992Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceTRAP transporter, 4TM/12TM fusion protein1e-104380
NC_010519:796229:8021878021878041631977Haemophilus somnus 2336 chromosome, complete genomeTRAP transporter 4TM/12TM fusion protein2e-85317
NC_008309:385592:3919073919073938831977Haemophilus somnus 129PT, complete genomeconserved integral membrane protein2e-85317
NC_014011:472650:4726504726504745901941Aminobacterium colombiense DSM 12261 chromosome, complete genomeTRAP transporter, 4TM/12TM fusion protein1e-83311
NC_014011:527681:5353145353145372121899Aminobacterium colombiense DSM 12261 chromosome, complete genomeTRAP transporter, 4TM/12TM fusion protein7e-73275
NC_014011:962474:9652199652199670991881Aminobacterium colombiense DSM 12261 chromosome, complete genomeTRAP transporter, 4TM/12TM fusion protein9e-72271
NC_015152:2026049:2051540205154020535131974Spirochaeta sp. Buddy chromosome, complete genomeTRAP transporter 4TM/12TM fusion protein4e-70266
NC_014633:837588:8540358540358560231989Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceTRAP transporter, 4TM/12TM fusion protein8e-65248
NC_009654:4716417:4716417471641747183661950Marinomonas sp. MWYL1, complete genomeTRAP transporter, 4TM/12TM fusion protein3e-60233
NC_009379:435404:4575584575584595702013Polynucleobacter sp. QLW-P1DMWA-1, complete genomeTRAP transporter, 4TM/12TM fusion protein3e-57223
NC_014221:38000:5635056350584042055Truepera radiovictrix DSM 17093 chromosome, complete genomeTRAP transporter, 4TM/12TM fusion protein1e-54215
NC_013849:337350:3458193458193476841866Ferroglobus placidus DSM 10642 chromosome, complete genomeTRAP transporter, 4TM/12TM fusion protein1e-53211
NC_012668:160357:1603571603571629212565Vibrio cholerae MJ-1236 chromosome 1, complete sequenceTRAP-type transport system fused permease component4e-52206
NC_013939:1841890:1860318186031818623452028Deferribacter desulfuricans SSM1, complete genomeTRAP-type transporter permease component2e-50200
NC_015276:1426000:1437729143772914403232595Marinomonas mediterranea MMB-1 chromosome, complete genomeTRAP transporter, 4TM/12TM fusion protein2e-47191
NC_014633:681198:6811986811986832552058Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceTRAP transporter, 4TM/12TM fusion protein3e-45184
NC_007799:284058:2931082931082957562649Ehrlichia chaffeensis str. Arkansas, complete genomeTRAP transporter, 4TM/12TM fusion protein2e-44181
NC_000854:1342983:1347941134794113501362196Aeropyrum pernix K1, complete genomehypothetical protein1e-43178
NC_006831:1112000:1133789113378911364342646Ehrlichia ruminantium str. Gardel, complete genomehypothetical protein2e-43178
NC_005295:1146500:1165536116553611681812646Ehrlichia ruminantium str. Welgevonden, complete genomeputative integral membrane protein2e-43177
NC_006832:1125000:1144135114413511467802646Ehrlichia ruminantium str. Welgevonden, complete genomehypothetical protein2e-43177
NC_013849:985978:9874899874899897892301Ferroglobus placidus DSM 10642 chromosome, complete genomeTRAP transporter, 4TM/12TM fusion protein1e-40168
NC_015276:3829059:3845176384517638478062631Marinomonas mediterranea MMB-1 chromosome, complete genomeTRAP transporter, 4TM/12TM fusion protein2e-40167
NC_016943:3270308:3304638330463833067402103Blastococcus saxobsidens DD2, complete genomeTRAP transporter, 4TM/12TM fusion protein4e-40166
NC_012883:360348:3603483603483626482301Thermococcus sibiricus MM 739, complete genomeTRAP-type transporter, fused permease components1e-38162
NC_015573:330966:3447523447523466801929Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeTRAP transporter, 4TM/12TM fusion protein8e-34145
NC_010617:558954:5589545589545612032250Kocuria rhizophila DC2201, complete genomeTRAP family transporter4e-32140
NC_019673:9084045:9092904909290490948801977Saccharothrix espanaensis DSM 44229 complete genomeTRAP transporter, 4TM/12TM fusion protein8e-32139
NC_009655:2148433:2156342215634221582281887Actinobacillus succinogenes 130Z chromosome, complete genomeTRAP transporter, 4TM/12TM fusion protein1e-30135
NC_020908:823589:8345358345358364301896Octadecabacter arcticus 238, complete genomeTRAP-transporter4TM/12TM-fusion protein5e-30133
NC_020911:3159290:3172142317214231740371896Octadecabacter antarcticus 307, complete genomeTRAP-transporter small permease/large permease fusion protein DctQ/DctM1e-29132
NC_014364:3633291:3631357363135736332941938Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeTRAP transporter, 4TM/12TM fusion protein4e-29130
NC_016645:279232:2927722927722948262055Pyrobaculum sp. 1860 chromosome, complete genomeTRAP transporter, 4TM/12TM fusion protein4e-28127
NC_009952:2381601:2415315241531524172341920Dinoroseobacter shibae DFL 12, complete genomeputative TRAP transporter2e-24114
NC_015224:1914833:1919407191940719206991293Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative C4-dicarboxylate transporter, large subunit2e-0964.7
NC_015500:78223:1043021043021056001299Treponema brennaborense DSM 12168 chromosome, complete genomeTRAP dicarboxylate transporter, DctM subunit9e-0962.8
NC_007503:1111457:1160849116084911621261278Carboxydothermus hydrogenoformans Z-2901, complete genomeTRAP dicarboxylate transporter, DctM subunit1e-0862.4
NC_016048:3856665:3864869386486938661491281Oscillibacter valericigenes Sjm18-20, complete genomeputative transporter5e-0860.1
NC_007963:2777066:2783855278385527851351281Chromohalobacter salexigens DSM 3043, complete genomeTRAP dicarboxylate transporter- DctM subunit1e-0759.3
NC_010634:1916000:1951154195115419524461293Yersinia pseudotuberculosis PB1/+, complete genomeTRAP dicarboxylate transporter, DctM subunit2e-0758.2
NC_006155:1916426:1951170195117019524621293Yersinia pseudotuberculosis IP 32953, complete genomeTRAP-T family C4-dicarboxylate transporter, large (DctM) subunit2e-0758.2
NC_014206:1618988:1620632162063216219151284Geobacillus sp. C56-T3 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctM4e-0757.4
NC_006510:1995916:2016959201695920182421284Geobacillus kaustophilus HTA426, complete genometransporter4e-0757.4
NC_020911:3046916:3061821306182130631041284Octadecabacter antarcticus 307, complete genomeputative TRAP transporter large permease DctM subunit4e-0757.4
NC_008344:669498:6910706910706923531284Nitrosomonas eutropha C91, complete genomeTRAP dicarboxylate transporter, DctM subunit5e-0757
NC_014011:1354261:1369461136946113707501290Aminobacterium colombiense DSM 12261 chromosome, complete genomeTRAP dicarboxylate transporter, DctM subunit5e-0757
NC_008392:666000:6847736847736861251353Burkholderia cepacia AMMD chromosome 3, complete sequenceTRAP dicarboxylate transporter, DctM subunit8e-0756.2
NC_011892:352652:3636273636273655581932Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completeTRAP dicarboxylate transporter, DctM subunit1e-0655.8
NC_007644:416000:4272074272074284871281Moorella thermoacetica ATCC 39073, complete genomeTRAP dicarboxylate transporter- DctM subunit1e-0655.8
NC_009457:1444449:1480233148023314815161284Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein1e-0655.5
NC_012578:1838470:1874263187426318755461284Vibrio cholerae M66-2 chromosome I, complete sequenceSialic acid TRAP transporter,large permease1e-0655.5
NC_012668:1688500:1719095171909517203781284Vibrio cholerae MJ-1236 chromosome 1, complete sequenceTRAP-type transport system large permease component1e-0655.5
NC_016445:1363831:1398530139853013998131284Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein1e-0655.5
NC_017270:1755552:1765881176588117671641284Vibrio cholerae LMA3984-4 chromosome chromosome I, completeTRAP-type transport system, large permease1e-0655.5
NC_015519:1888917:1888917188891718902061290Tepidanaerobacter sp. Re1 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctM1e-0655.5
NC_009997:3483157:3502031350203135034281398Shewanella baltica OS195, complete genomeTRAP dicarboxylate transporter, DctM subunit3e-0654.7
NC_016901:3430401:3449243344924334506401398Shewanella baltica OS678 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctM3e-0654.7
NC_007509:1043602:1047077104707710484291353Burkholderia sp. 383 chromosome 3, complete sequenceTRAP dicarboxylate transporter, DctM subunit3e-0654.7
NC_007963:1190847:1213144121314412144241281Chromohalobacter salexigens DSM 3043, complete genomeTRAP dicarboxylate transporter- DctM subunit4e-0653.9
NC_009654:304000:3171453171453184221278Marinomonas sp. MWYL1, complete genomeTRAP dicarboxylate transporter, DctM subunit6e-0653.5
NC_016002:2534516:2554000255400025555081509Pseudogulbenkiania sp. NH8B, complete genomeTRAP dicarboxylate transporter subunit DctM6e-0653.1
NC_015573:162000:1738181738181750981281Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeTRAP dicarboxylate transporter subunit DctM8e-0652.8