Pre_GI: BLASTP Hits

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Query: NC_011959:972798:994692 Thermomicrobium roseum DSM 5159, complete genome

Start: 994692, End: 996317, Length: 1626

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011959:1965158:1979776197977619808911116Thermomicrobium roseum DSM 5159, complete genomeErfK/YbiS/YcfS/YnhG family protein5e-41169
NC_011961:85083:8819088190895301341Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequenceVanW family protein1e-32141
NC_009523:1101214:1103378110337811046431266Roseiflexus sp. RS-1 chromosome, complete genomehypothetical protein2e-25117
NC_020389:1730376:1739312173931217425843273Methanosarcina mazei Tuc01, complete genomehypothetical protein5e-22106
NC_009523:1101214:110996911099691110814846Roseiflexus sp. RS-1 chromosome, complete genomehypothetical protein3e-1480.9
NC_003552:3479000:3485995348599534878871893Methanosarcina acetivorans C2A, complete genomehypothetical protein7e-1479.3