Pre_GI: BLASTP Hits

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Query: NC_011959:972798:989999 Thermomicrobium roseum DSM 5159, complete genome

Start: 989999, End: 991777, Length: 1779

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011761:1904637:1924414192441419257811368Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeGTP-binding protein2e-73277
NC_011206:1792621:1810060181006018114271368Acidithiobacillus ferrooxidans ATCC 53993, complete genomehypothetical protein2e-73277
NC_010001:649000:6540746540746555461473Clostridium phytofermentans ISDg, complete genomehypothetical protein2e-62240
NC_011899:86800:1008151008151019571143Halothermothrix orenii H 168, complete genomehypothetical protein3e-62240
NC_014378:131810:1354901354901367521263Acetohalobium arabaticum DSM 5501 chromosome, complete genomehypothetical protein3e-57223
NC_015391:1248583:1249481124948112506921212Carnobacterium sp. 17-4 chromosome, complete genomehypothetical protein1e-53211
NC_016627:3815690:3821678382167838229311254Clostridium clariflavum DSM 19732 chromosome, complete genomehypothetical protein1e-52208
NC_014219:1736000:1742788174278817440261239Bacillus selenitireducens MLS10 chromosome, complete genomehypothetical protein2e-47190
NC_007168:454000:4705844705844719091326Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein5e-47189
NC_002967:2194829:2213125221312522151252001Treponema denticola ATCC 35405, complete genomehypothetical protein1e-45184
NC_014484:52311:8467984679864421764Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein3e-38160
NC_007347:1239982:125578412557841256392609Ralstonia eutropha JMP134 chromosome 1, complete sequenceputative Uncharacterized conserved protein5e-1376.6