Pre_GI: BLASTP Hits

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Query: NC_011770:860944:881354 Pseudomonas aeruginosa LESB58, complete genome

Start: 881354, End: 881686, Length: 333

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013892:671000:690883690883691197315Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-1374.7
NC_013892:2005480:200849920084992008813315Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-1374.7
NC_004129:4368356:437147443714744371788315Pseudomonas fluorescens Pf-5, complete genomeholin, lambda family2e-1270.9
NC_011294:1220526:123559112355911235935345Salmonella enterica subsp. enterica serovar Enteritidis strbacteriophage holin1e-1168.6
NC_016831:1734292:174181317418131742148336Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative bacteriophage holin1e-1168.6
NC_011205:1345511:137147013714701371805336Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phage holin, lambda family1e-1168.6
NC_014228:3022903:304192930419293042252324Xenorhabdus nematophila ATCC 19061, complete genomeholin3e-1167.4
NC_012962:4942000:495068649506864951009324Photorhabdus asymbiotica, complete genomesimilar to bacteriophage protein2e-1167.4
NC_015968:3301958:330616233061623306503342Enterobacter asburiae LF7a chromosome, complete genomephage holin, lambda family2e-0961.6
NC_009655:1357486:137879113787911379180390Actinobacillus succinogenes 130Z chromosome, complete genomephage holin3e-0960.5
NC_004578:3849835:385318938531893853512324Pseudomonas syringae pv. tomato str. DC3000, complete genomeholin3e-0753.9
NC_005773:2177184:219141121914112191725315Pseudomonas syringae pv. phaseolicola 1448A, complete genomeprophage PSPPH02, holin, lambda family3e-0753.9