Pre_GI: BLASTP Hits

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Query: NC_011770:4924127:4959191 Pseudomonas aeruginosa LESB58, complete genome

Start: 4959191, End: 4960168, Length: 978

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006350:3865584:388632238863223887254933Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative plasmid replication protein2e-50199
NC_015259:624979:637728637728638627900Polymorphum gilvum SL003B-26A1 chromosome, complete genomePutative RepA replicase protein5e-50198
NC_007973:3065632:307223730722373073226990Ralstonia metallidurans CH34 chromosome 1, complete sequenceplasmid encoded RepA protein5e-40164
NC_015382:266000:295729573931975Burkholderia gladioli BSR3 plasmid bgla_1p, complete sequencePutative RepA replicase protein8e-40164
NC_009800:2651730:266346526634652664313849Escherichia coli HS, complete genomeplasmid encoded RepA protein6e-30131
NC_008782:867344:885127885127886035909Acidovorax sp. JS42, complete genomeplasmid encoded RepA protein8e-26117
NC_015853:1:117131171312702990Acidithiobacillus caldus SM-1 plasmid pLAtc2, complete sequenceRepA3e-22106
NC_007507:101887:1084411084411096671227Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,putative replication protein A1e-21103
NC_013211:163390:171897171897172820924Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-020, completeplasmid replication initiator RepA1e-20100
NC_017105:163390:171897171897172820924Acetobacter pasteurianus IFO 3283-01-42C plasmid pAPA42C_020,plasmid replication initiator RepA1e-20100
NC_017113:163390:171897171897172820924Acetobacter pasteurianus IFO 3283-12 plasmid pAPA12-020, completeplasmid replication initiator RepA1e-20100
NC_017118:163390:171897171897172820924Acetobacter pasteurianus IFO 3283-03 plasmid pAPA03-020, completeplasmid replication initiator RepA1e-20100
NC_017122:163390:171897171897172820924Acetobacter pasteurianus IFO 3283-07 plasmid pAPA07-020, completeplasmid replication initiator RepA1e-20100
NC_017126:163390:171897171897172820924Acetobacter pasteurianus IFO 3283-22 plasmid pAPA22-020, completeplasmid replication initiator RepA1e-20100
NC_017131:163390:171897171897172820924Acetobacter pasteurianus IFO 3283-26 plasmid pAPA26-020, completeplasmid replication initiator RepA1e-20100
NC_017149:163390:171897171897172820924Acetobacter pasteurianus IFO 3283-32 plasmid pAPA32-020, completeplasmid replication initiator RepA1e-20100
NC_008702:2230396:223864922386492239074426Azoarcus sp. BH72, complete genomeprobable replicase protein(repA)9e-1994.7
NC_008702:2230396:223914422391442239623480Azoarcus sp. BH72, complete genomeprotein kinase2e-1893.2
NC_003919:2824000:2840860284086028418611002Xanthomonas axonopodis pv. citri str. 306, complete genomereplication protein2e-1790.1
NC_008752:415599:421826421826422725900Acidovorax avenae subsp. citrulli AAC00-1, complete genomeplasmid encoded RepA protein3e-1789.4
NC_009664:4423829:444535544453554446227873Kineococcus radiotolerans SRS30216, complete genomeplasmid encoded RepA protein6e-1685.1
NC_009664:4423829:464841046484104649252843Kineococcus radiotolerans SRS30216, complete genomeplasmid encoded RepA protein7e-1685.1