Pre_GI: BLASTP Hits

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Query: NC_011769:2016000:2037204 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Start: 2037204, End: 2037599, Length: 396

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002937:1578213:158046615804661580864399Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeholin, putative9e-29125
NC_007434:1712000:179653417965341796890357Burkholderia pseudomallei 1710b chromosome I, complete sequencegp707e-1579.3
NC_009656:5297000:530274053027405303138399Pseudomonas aeruginosa PA7 chromosome, complete genomeHNH endonuclease3e-1373.9
NC_013722:2848366:285204128520412852406366Xanthomonas albilineans, complete genomeputative phage-related protein.3e-1373.9
NC_015968:3301958:330431433043143304664351Enterobacter asburiae LF7a chromosome, complete genomeHNH endonuclease2e-1167.4
NC_020260:1615135:163637316363731636732360Cronobacter sakazakii Sp291, complete genomeHNH endonuclease9e-1165.5
NC_007712:4023516:404903140490314049384354Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein2e-1064.3
NC_015761:1017301:102847810284781028828351Salmonella bongori NCTC 12419, complete genomephage-like protein4e-1063.5
NC_016612:3803130:382706338270633827425363Klebsiella oxytoca KCTC 1686 chromosome, complete genomeHNH endonuclease domain protein5e-1063.2
NC_006371:1411335:143607914360791436393315Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical protein5e-1063.2
NC_009706:2673906:272491127249112725270360Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein8e-1062.4
NC_011283:3379181:340349434034943403856363Klebsiella pneumoniae 342 chromosome, complete genomeHNH endonuclease domain protein1e-0962
NC_009436:2776410:280668128066812807031351Enterobacter sp. 638, complete genomeHNH endonuclease1e-0961.6
NC_010320:1268355:128310212831021283461360Thermoanaerobacter sp. X514 chromosome, complete genomeHNH endonuclease3e-0960.8
NC_007645:4677965:468273046827304683086357Hahella chejuensis KCTC 2396, complete genomeRestriction endonuclease3e-0960.8
UCMB5137:1522159:153014215301421530516375Bacillus atrophaeus UCMB-5137putative HNH endonuclease3e-0960.5
NC_003909:386880:405970405970406329360Bacillus cereus ATCC 10987, complete genomeHNH endonuclease domain protein1e-0858.5
NC_016631:2112175:213145121314512131828378Granulicella mallensis MP5ACTX8 chromosome, complete genomeHNH endonuclease7e-0856.2
NC_015520:3060495:308354930835493083899351Mahella australiensis 50-1 BON chromosome, complete genomeHNH endonuclease7e-0856.2
NC_021064:1211480:122050912205091220892384Propionibacterium avidum 44067, complete genomephage associated protein9e-0855.5
NC_009012:1934107:196779219677921968151360Clostridium thermocellum ATCC 27405, complete genomeHNH endonuclease9e-0855.5
NC_011898:3367457:339927233992723399631360Clostridium cellulolyticum H10, complete genomeHNH endonuclease1e-0755.5
NC_010645:1496816:151577615157761516159384Bordetella avium 197N, complete genomephage protein1e-0755.1
NC_016633:3069518:310281231028123103174363Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomerestriction endonuclease1e-0755.1
NC_016627:4203775:422823042282304228589360Clostridium clariflavum DSM 19732 chromosome, complete genomerestriction endonuclease3e-0754.3
NC_014393:937000:951789951789952181393Clostridium cellulovorans 743B chromosome, complete genomeHNH endonuclease2e-0754.3
NC_015519:2526047:252635225263522526738387Tepidanaerobacter sp. Re1 chromosome, complete genomeHNH endonuclease2e-0754.3
NC_014829:2915500:293110729311072931502396Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeHNH endonuclease2e-0754.3
NC_016627:4323370:435619343561934356552360Clostridium clariflavum DSM 19732 chromosome, complete genomerestriction endonuclease3e-0753.9
NC_015520:2974048:299361129936112993988378Mahella australiensis 50-1 BON chromosome, complete genomeHNH endonuclease1e-0652
NC_006270:3418097:345361934536193453993375Bacillus licheniformis ATCC 14580, complete genomeputative electron transporter2e-0651.2
NC_014393:4775452:481331648133164813684369Clostridium cellulovorans 743B chromosome, complete genomeHNH endonuclease8e-0649.3