Pre_GI: BLASTP Hits

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Query: NC_011751:643976:645962 Escherichia coli UMN026 chromosome, complete genome

Start: 645962, End: 646363, Length: 402

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a woman with uncomplicated acute cystitis in 1999 in the USA. This strain is drug resistant. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012967:531000:537948537948538349402Escherichia coli B str. REL606 chromosome, complete genomeExcisionase5e-74275
NC_012947:3231893:324708632470863247457372Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeexcisionase5e-68255
NC_016860:364981:369927369927370277351Salmonella enterica subsp. enterica serovar Typhimurium strexcisionase3e-45180
NC_017328:303987:311458311458311805348Shigella flexneri 2002017 chromosome, complete genomexis4e-1683.2