Pre_GI: BLASTP Hits

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Query: NC_011742:3245500:3254974 Escherichia coli S88 chromosome, complete genome

Start: 3254974, End: 3256434, Length: 1461

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli S88 is a serotype O45:K1 strain isolated from a case of neonatal meningitis. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004431:4955658:4965038496503849664981461Escherichia coli CFT073, complete genomehypothetical protein0925
NC_008563:3332114:3340190334019033416381449Escherichia coli APEC O1, complete genomehypothetical protein0923
NC_016620:781995:7861157861157878391725Bacteriovorax marinus SJ, complete genomehypothetical protein4e-47189
NC_011071:4000620:4012879401287940146931815Stenotrophomonas maltophilia R551-3, complete genomeOLD family ATP-dependent endonuclease-like protein8e-39161
NC_016609:5890292:5928529592852959303311803Niastella koreensis GR20-10 chromosome, complete genomeATP-dependent OLD family endonuclease1e-1894.7
NC_015660:3174424:3192684319268431945971914Geobacillus thermoglucosidasius C56-YS93 chromosome, completeputative OLD protein7e-1892.4
NC_014551:2510000:2516500251650025183141815Bacillus amyloliquefaciens DSM 7, complete genomeOvercoming lysogenization defect protein2e-1790.9
NC_009253:897684:9278539278539296281776Desulfotomaculum reducens MI-1 chromosome, complete genomeATP-dependent OLD family endonuclease8e-1582.4
NC_014121:598669:6080956080956098341740Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeATP-dependent OLD family endonuclease3e-1273.9
NC_010617:774914:7909067909067929842079Kocuria rhizophila DC2201, complete genomehypothetical protein6e-1169.3
NC_013894:464907:4724864724864741711686Thermocrinis albus DSM 14484 chromosome, complete genomeATP-dependent endonuclease of the OLD family-like protein3e-0860.5
NC_014311:3076519:3095153309515330969521800Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein7e-0858.9
NC_013158:1905643:1929947192994719315361590Halorhabdus utahensis DSM 12940, complete genomeATP-dependent endonuclease of the OLD family- like protein4e-0756.6
NC_018645:3029785:3045540304554030473121773Desulfobacula toluolica Tol2, complete genomeATP-dependent endonuclease, OLD family4e-0756.6
NC_007974:2048000:2083641208364120854371797Ralstonia metallidurans CH34 chromosome 2, complete sequenceputative exonuclease2e-0654.3
NC_014974:404015:4173414173414189271587Thermus scotoductus SA-01 chromosome, complete genomeputative ATP-dependent endonuclease of the OLD family3e-0653.9