Pre_GI: BLASTP Hits

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Query: NC_011660:1889504:1894485 Listeria monocytogenes HCC23 chromosome, complete genome

Start: 1894485, End: 1894811, Length: 327

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: Listeria monocytogenes HCC23 was isolated from channel catfish. This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor". There are 13 serovars associated with Listeria monocytogenes, and the serovar 4b strains are more commonly associated with invasive disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008555:696217:714185714185714511327Listeria welshimeri serovar 6b str. SLCC5334, complete genometranscriptional regulator, PadR family2e-52203
NC_013891:640784:661436661436661762327Listeria seeligeri serovar 1/2b str. SLCC3954, complete genometranscriptional regulator, PadR family6e-47185
NC_016023:1419217:143151914315191431875357Bacillus coagulans 36D1 chromosome, complete genomePadR-like family transcriptional regulator2e-32137
NC_015690:1818333:183487818348781835210333Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein2e-32137
NC_016935:1636278:169910916991091699438330Paenibacillus mucilaginosus 3016 chromosome, complete genomePadR family transcriptional regulator2e-31134
NC_012914:5194791:520760352076035207929327Paenibacillus sp. JDR-2, complete genometranscriptional regulator, PadR-like family5e-31132
NC_016935:2347691:236477623647762365081306Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein2e-30131
NC_015589:1468774:147535214753521475732381Desulfotomaculum ruminis DSM 2154 chromosome, complete genometranscriptional regulator PadR family protein1e-27121
NC_004193:375416:597160597160597489330Oceanobacillus iheyensis HTE831, complete genomehypothetical protein2e-1684.3
NC_006582:2205154:221626422162642216584321Bacillus clausii KSM-K16, complete genometranscriptional regulator, PadR family5e-1683.2
NC_013406:1145268:114943211494321149938507Paenibacillus sp. Y412MC10 chromosome, complete genomePadR-like family transcriptional regulator3e-1373.9
NC_007644:2452244:246911124691112469470360Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, PadR-like family3e-1270.5
NC_016935:7426389:742976874297687430088321Paenibacillus mucilaginosus 3016 chromosome, complete genomePadR family transcriptional regulator8e-1165.9
NC_015690:7334786:733968873396887340008321Paenibacillus mucilaginosus KNP414 chromosome, complete genomePadR family transcriptional regulator1e-1065.1
NC_014323:3976351:401955840195584019887330Herbaspirillum seropedicae SmR1 chromosome, complete genometranscription regulator protein2e-1064.3
NC_015434:228912:250216250216250554339Verrucosispora maris AB-18-032 chromosome, complete genomePadR-like family transcriptional regulator2e-1064.3
NC_014171:1018338:102901910290191029351333Bacillus thuringiensis BMB171 chromosome, complete genomePadR family transcriptional regulator2e-1064.3
NC_004722:1008500:101926110192611019602342Bacillus cereus ATCC 14579, complete genomeTranscriptional regulator, PadR family4e-1063.5
NC_011725:1032500:104332810433281043660333Bacillus cereus B4264 chromosome, complete genomePadR family transcriptional regulator4e-1063.5
NC_017208:1050414:106205310620531062385333Bacillus thuringiensis serovar chinensis CT-43 chromosome, completePadR family transcriptional regulator4e-1063.5
NC_009464:931647:932620932620932970351Uncultured methanogenic archaeon RC-I, complete genomeputative transcription regulator (PadR family)5e-1063.2
NC_010184:1017000:102748510274851027817333Bacillus weihenstephanensis KBAB4, complete genometranscriptional regulator, PadR-like family7e-1062.4
NC_015144:367278:373210373210373542333Weeksella virosa DSM 16922 chromosome, complete genometranscriptional regulator, PadR-like family2e-0961.2
NC_016048:2343500:235035923503592350718360Oscillibacter valericigenes Sjm18-20, complete genomeputative PadR family transcriptional regulator7e-0959.3
NC_019897:700332:733396733396733758363Thermobacillus composti KWC4 chromosome, complete genometranscriptional regulator1e-0858.9
NC_006348:2738425:275557927555792755920342Burkholderia mallei ATCC 23344 chromosome 1, complete sequencetranscriptional regulator, PadR family2e-0858.2
NC_013739:2057781:207558820755882075941354Conexibacter woesei DSM 14684, complete genometranscriptional regulator, PadR-like family2e-0858.2
NC_010184:4497473:450447345044734504817345Bacillus weihenstephanensis KBAB4, complete genometranscriptional regulator, PadR-like family3e-0857.4
NC_009328:293000:348394348394348717324Geobacillus thermodenitrificans NG80-2 chromosome, complete genometranscriptional regulator3e-0857.4
NC_013730:4573077:459200745920074592351345Spirosoma linguale DSM 74, complete genometranscriptional regulator, PadR-like family4e-0857
NC_013665:1766158:179097717909771791321345Methanocella paludicola SANAE, complete genomeputative PadR-like family transcriptional regulator6e-0856.2
NC_016109:8635989:863794386379438638305363Kitasatospora setae KM-6054, complete genomeputative PadR family transcriptional regulator7e-0855.8
NC_012483:996555:101723810172381017600363Acidobacterium capsulatum ATCC 51196, complete genometranscriptional regulator, PadR family7e-0855.8
NC_003888:3111998:311595731159573116334378Streptomyces coelicolor A3(2), complete genomehypothetical protein1e-0755.5
NC_012673:785718:792796792796793152357Exiguobacterium sp. AT1b, complete genometranscriptional regulator, PadR-like family2e-0754.7
NC_018664:2638102:264078026407802641118339Clostridium acidurici 9a chromosome, complete genometranscriptional regulator, PadR family3e-0754.3
NC_018748:495011:494685494685495014330Emticicia oligotrophica DSM 17448 chromosome, complete genometranscriptional regulator, PadR-like family3e-0754.3
NC_009712:334143:337653337653337979327Candidatus Methanoregula boonei 6A8, complete genomePadR-like family transcriptional regulator4e-0753.5
NC_004347:718091:749154749154749510357Shewanella oneidensis MR-1, complete genomehypothetical protein5e-0753.1
NC_005957:4472800:447576544757654476109345Bacillus thuringiensis serovar konkukian str. 97-27, completepossible transcriptional regulator, PadR family9e-0752.4
NC_014328:3747973:375165537516553751996342Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative PadR family transcriptional regulator2e-0651.2
NC_015589:814530:827671827671828009339Desulfotomaculum ruminis DSM 2154 chromosome, complete genometranscriptional regulator PadR family protein2e-0651.2
NC_014335:4414052:441474244147424415086345Bacillus cereus biovar anthracis str. CI chromosome, completeputative PadR family transcriptional regulator4e-0650.1
NC_014963:4416339:442588144258814426225345Terriglobus saanensis SP1PR4 chromosome, complete genomePadR family transcriptional regulator4e-0650.1
NC_015391:2099472:211710521171052117428324Carnobacterium sp. 17-4 chromosome, complete genomehypothetical protein9e-0648.9