Pre_GI: BLASTP Hits

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Query: NC_011601:4096427:4128001 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Start: 4128001, End: 4128372, Length: 372

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013364:3701895:374564237456423746013372Escherichia coli O111:H- str. 11128, complete genomenegative regulator GrlR1e-65247
NC_002655:4653160:468321846832184683589372Escherichia coli O157:H7 EDL933, complete genomehypothetical protein2e-65247
NC_002695:4584177:461423546142354614606372Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-65247
NC_011353:4688000:471733947173394717710372Escherichia coli O157:H7 str. EC4115 chromosome, complete genomenegative regulator GrlR2e-65247
NC_013008:4643825:467338046733804673751372Escherichia coli O157:H7 str. TW14359 chromosome, complete genomenegative regulator GrlR2e-65247
NC_013941:4470932:450173945017394502110372Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein2e-65247
NC_013361:5319497:533936353393635339719357Escherichia coli O26:H11 str. 11368 chromosome, complete genomenegative regulator GrlR2e-58224
NC_013353:3669500:370416237041623704518357Escherichia coli O103:H2 str. 12009, complete genomenegative regulator GrlR5e-58222
AP010958:3669500:370416237041623704518357Escherichia coli O103:H2 str. 12009 DNA, complete genomenegative regulator GrlR5e-58222
NC_015761:299386:347823347823348167345Salmonella bongori NCTC 12419, complete genomehypothetical protein8e-1682.4
NC_014837:1570500:158356315835631583883321Pantoea sp. At-9b chromosome, complete genomehypothetical protein1e-0755.5