Pre_GI: BLASTP Hits

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Query: NC_011601:2139188:2149681 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Start: 2149681, End: 2149923, Length: 243

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008253:1938975:196741419674141967656243Escherichia coli 536, complete genomehypothetical protein9e-36148
NC_004431:2185750:221425622142562214498243Escherichia coli CFT073, complete genomehypothetical protein9e-36148
NC_004547:1873390:189150518915051891747243Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeHns-like DNA-binding protein1e-29128
NC_010067:892729:923836923836924072237Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-28124
NC_013421:1696746:170395217039521704194243Pectobacterium wasabiae WPP163, complete genome9e-28122
NC_013716:2139952:216163021616302161872243Citrobacter rodentium ICC168, complete genomeH-NS-like DNA-binding protein3e-27120