Pre_GI: BLASTP Hits

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Query: NC_011601:1039500:1052541 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Start: 1052541, End: 1052756, Length: 216

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004431:1401681:141304014130401413420381Escherichia coli CFT073, complete genomehypothetical protein5e-37152
NC_011742:1177946:119185811918581192244387Escherichia coli S88 chromosome, complete genomerepressor protein8e-37152
NC_017328:303987:318413318413318628216Shigella flexneri 2002017 chromosome, complete genomecro protein3e-36150
NC_013364:2645438:265199426519942652209216Escherichia coli O111:H- str. 11128, complete genomeputative antirepressor protein Cro3e-36150
NC_008563:1175035:118837111883711188655285Escherichia coli APEC O1, complete genomehypothetical protein3e-36150
NC_013941:975353:989930989930990214285Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein3e-36150
NC_014306:3524980:356761535676153567845231Erwinia billingiae Eb661, complete genomePhage Cro protein8e-1992.4
NC_013850:1887556:190073119007311900940210Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, XRE family7e-1165.9
NC_003198:1908238:192456419245641924806243Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative cro repressor8e-1165.9
NC_016612:3803130:381468138146813814902222Klebsiella oxytoca KCTC 1686 chromosome, complete genomehelix-turn-helix domain-containing protein3e-1063.9
NC_009783:1956000:195751919575191957785267Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein4e-0960.1
NC_007712:1926500:194404719440471944358312Sodalis glossinidius str. 'morsitans', complete genomeputative phage repressor2e-0754.7
NC_012660:3116500:312846731284673128694228Pseudomonas fluorescens SBW25 chromosome, complete genomeputative cro repressor1e-0651.6