Pre_GI: BLASTP Hits

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Query: NC_011205:329155:342886 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 342886, End: 343353, Length: 468

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:311796:318800318800319267468Salmonella enterica subsp. enterica serovar Enteritidis strexported pathogenicity island protein4e-72269
NC_006905:326517:333900333900334367468Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein1e-71268
NC_012125:326909:333806333806334237432Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein7e-71265
NC_011080:333121:343087343087343554468Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein9e-71265
NC_011149:309556:320628320628321095468Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein1e-70264
NC_011274:311843:337603337603338001399Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91exported pathogenicity island protein4e-57219