Pre_GI: BLASTP Hits

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Query: NC_011149:2912219:2918415 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 2918415, End: 2919281, Length: 867

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016860:3029272:303332830333283034194867Salmonella enterica subsp. enterica serovar Typhimurium strsecreted effector protein4e-169593
NC_003197:3005842:300989830098983010806909Salmonella typhimurium LT2, complete genomesecreted effector protein4e-169593
NC_011294:2890500:289455728945572895465909Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island membrane protein8e-169592
NC_011274:2881306:288536228853622886270909Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island membrane protein8e-169592
NC_011094:2913500:291709529170952917961867Salmonella enterica subsp. enterica serovar Schwarzengrund strsecreted effector protein3e-168590
NC_016857:3028421:303247730324773033382906Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74AvrA2e-167587
NC_016810:3028421:303247730324773033382906Salmonella enterica subsp. enterica serovar Typhimurium strAvirulence determinant of plant pathogenic bacteria2e-167587
NC_016831:2867766:287185128718512872687837Salmonella enterica subsp. enterica serovar Gallinarum/pullorumpathogenicity island membrane protein9e-164575
NC_011083:2980356:298441229844122985254843Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,secreted effector protein1e-163575
NC_011205:3050235:305432030543203055156837Salmonella enterica subsp. enterica serovar Dublin str. CT_020218534e-163573
NC_017046:3027161:303121730312173032056840Salmonella enterica subsp. enterica serovar Typhimurium str. 798Avirulence determinant of plant pathogenic bacteria4e-162570
NC_011080:2982346:298644229864422987245804Salmonella enterica subsp. enterica serovar Newport str. SL254,3e-153541
NC_016863:2974333:297846029784602979296837Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1secreted effector protein3e-147521
NC_015761:2726000:273013527301352731034900Salmonella bongori NCTC 12419, complete genomeeffector protein5e-128457
NC_014932:1232346:1259472125947212605181047Bartonella clarridgeiae 73, complete genomehypothetical protein6e-53207
NC_004605:1385444:141653514165351417404870Vibrio parahaemolyticus RIMD 2210633 chromosome II, completeputative targeted effector protein YopP9e-34144
NC_008752:2936933:2975434297543429765551122Acidovorax avenae subsp. citrulli AAC00-1, complete genomepeptidase C551e-0860.5
NC_008752:3217695:3227189322718932283101122Acidovorax avenae subsp. citrulli AAC00-1, complete genomepeptidase C551e-0860.5