Pre_GI: BLASTP Hits

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Query: NC_011149:2179592:2190205 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 2190205, End: 2190567, Length: 363

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:792489:805919805919806398480Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein4e-64242
NC_006511:792543:805973805973806452480Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein4e-64242
NC_004631:799810:813172813172813651480Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-63240
NC_003198:2179688:219028521902852190764480Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-63240
NC_016832:799764:813243813243813605363Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein4e-63239
NC_007347:1:197611976120273513Ralstonia eutropha JMP134 chromosome 1, complete sequencehypothetical protein5e-1992.8
NC_007347:1:155841558416255672Ralstonia eutropha JMP134 chromosome 1, complete sequencehypothetical protein2e-1787.8
NC_013956:4579759:458526145852614585542282Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein4e-1580.1