Pre_GI: BLASTP Hits

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Query: NC_011149:1987291:2020531 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 2020531, End: 2022492, Length: 1962

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009659:3815966:3829338382933838312841947Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein5e-151535
NC_012724:3222415:3232624323262432346061983Burkholderia glumae BGR1 chromosome 1, complete genomeTetratricopeptide TPR_21e-143510
NC_014623:3029853:3057755305775530595211767Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein5e-1170.1
NC_011729:1496848:1496848149684815006783831Cyanothece sp. PCC 7424 chromosome, complete genomehypothetical protein7e-1169.7
NC_005071:1903581:1909682190968219113311650Prochlorococcus marinus str. MIT 9313, complete genomeTPR repeat1e-0965.5
NC_014733:1073540:1094406109440610961061701Methylovorus sp. MP688 chromosome, complete genometetratricopeptide tpr_2 repeat protein3e-0861.2
NC_017030:3091313:30913133091313310358812276Corallococcus coralloides DSM 2259 chromosome, complete genomeadventurous gliding motility protein AgmK3e-0860.8
NC_010793:1508974:1515258151525815164031146Orientia tsutsugamushi str. Ikeda, complete genomeTPR repeat-containing protein 01_091e-0758.9
NC_010793:1158279:1170884117088411720291146Orientia tsutsugamushi str. Ikeda, complete genomeTPR repeat-containing protein 01_071e-0758.9
NC_014408:1455851:1466636146663614677961161Methanothermobacter marburgensis str. Marburg chromosome, completetetratricopeptide repeat domain-containing protein3e-0757.8
NC_015416:223968:241305241305242090786Methanosaeta concilii GP-6 chromosome, complete genomeTPR-repeat-containing protein5e-0757
NC_000916:31459:4322743227444381212Methanothermobacter thermautotrophicus str. Delta H, completeO-linked GlcNAc transferase7e-0756.2
NC_014010:1392536:1447141144714114485471407Candidatus Puniceispirillum marinum IMCC1322 chromosome, completetetratricopeptide repeat family protein7e-0756.2
NC_019942:112182:1333601333601351501791Aciduliprofundum sp. MAR08-339, complete genometetratricopeptide repeat protein1e-0655.8
NC_014150:2617072:2626326262632626285782253Brachyspira murdochii DSM 12563 chromosome, complete genomeTPR repeat-containing protein1e-0655.5
NC_015425:1687050:170901517090151709941927Clostridium botulinum BKT015925 chromosome, complete genomehypothetical protein1e-0655.5
NC_014010:1392536:1444174144417414464802307Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeTPR repeat protein2e-0655.1
NC_000911:1718820:173913017391301740020891Synechocystis sp. PCC 6803, complete genomehypothetical protein2e-0654.7
NC_017039:1717848:173815817381581739048891Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein2e-0654.7
NC_017052:1717836:173814617381461739036891Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein2e-0654.7
NC_017277:1717637:173794717379471738837891Synechocystis sp. PCC 6803, complete genomehypothetical protein2e-0654.7
NC_000916:31459:415174151742203687Methanothermobacter thermautotrophicus str. Delta H, completeTPR-repeat-containing protein3e-0654.3
NC_019977:1245894:1262204126220412649452742Methanomethylovorans hollandica DSM 15978, complete genomeputative endonuclease related to Holliday junction resolvase3e-0654.3
NC_000916:31459:5142651426525651140Methanothermobacter thermautotrophicus str. Delta H, completeO-linked GlcNAc transferase3e-0653.9
NC_019908:121178:1211781211781230281851Brachyspira pilosicoli P43/6/78 chromosome, complete genomehypothetical protein3e-0653.9
NC_007677:3316540:3338786333878633404501665Salinibacter ruber DSM 13855, complete genomeTPR repeat protein4e-0653.9
NC_014408:1018448:1026328102632810275481221Methanothermobacter marburgensis str. Marburg chromosome, completetetratricopeptide repeat domain-containing protein5e-0653.5
NC_017297:1280963:128318612831861284097912Clostridium botulinum F str. 230613 chromosome, complete genomehypothetical protein6e-0653.1
NC_011027:1488455:1496721149672114983311611Chlorobaculum parvum NCIB 8327, complete genomeTPR repeat-containing protein6e-0653.1
NC_003454:249304:2679022679022697881887Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeTetratricopeptide repeat family protein6e-0653.1
NC_015416:1478775:150575615057561506712957Methanosaeta concilii GP-6 chromosome, complete genomeTPR repeat-containing protein8e-0652.8
NC_014010:1392536:1448603144860314503571755Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeTPR repeat protein8e-0652.8
NC_005071:1903581:1913984191398419164732490Prochlorococcus marinus str. MIT 9313, complete genomeTPR repeat:HAT (Half-A-TPR) repeat8e-0652.8
NC_012440:1841315:1861196186119618622331038Persephonella marina EX-H1, complete genomeTPR Domain containing protein9e-0652.8