Pre_GI: BLASTP Hits

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Query: NC_011149:1987291:2013290 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 2013290, End: 2014024, Length: 735

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011601:2139188:215145521514552152189735Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA-binding protein1e-139495
NC_016831:947281:962635962635963369735Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative DNA-binding protein5e-139493
NC_011294:2053991:208008720800872080821735Salmonella enterica subsp. enterica serovar Enteritidis strDNA-binding protein5e-139493
NC_011205:2180598:220710522071052207839735Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853DNA-binding protein5e-139493
NC_011274:2044000:207115220711522071949798Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91DNA-binding protein3e-138490
NC_004547:1873390:189538418953841896118735Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative DNA-binding protein3e-120431
NC_013716:2139952:215974221597422160410669Citrobacter rodentium ICC168, complete genomeputative DNA-binding protein2e-23109
NC_012214:1650523:166840316684031668852450Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein1e-1996.7
NC_009801:2898426:293020829302082930771564Escherichia coli E24377A, complete genomehypothetical protein9e-1373.9
NC_011094:2791719:281194728119472812510564Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-1273.2
NC_010067:892729:922509922509923210702Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-1272.4