Pre_GI: BLASTP Hits

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Query: NC_011149:1236689:1244564 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 1244564, End: 1245508, Length: 945

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015554:4648919:466358646635864664449864Alteromonas sp. SN2 chromosome, complete genomehypothetical protein3e-1272.8
NC_015566:4350080:437173543717354372604870Serratia sp. AS12 chromosome, complete genomehypothetical protein1e-1170.9
NC_016945:370471:392334392334393191858Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein1e-1067.4
NC_002506:370629:392515392515393372858Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein3e-1065.9
NC_009456:787322:859283859283860140858Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein2e-0963.2
NC_012583:361241:403802403802404659858Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein2e-0963.2
NC_007614:109000:116675116675117574900Nitrosospira multiformis ATCC 25196 chromosome 1, completehypothetical protein5e-0962
NC_010694:2492378:249952624995262500452927Erwinia tasmaniensis, complete genomehypothetical protein2e-0859.7
NC_014311:1:621362137034822Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein7e-0858.5
NC_011138:3881446:389461338946133895443831Alteromonas macleodii 'Deep ecotype', complete genomehypothetical protein1e-0653.9
NC_007912:2958000:295804329580432958789747Saccharophagus degradans 2-40, complete genomehypothetical protein2e-0653.9