Pre_GI: BLASTP Hits

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Query: NC_011147:4460726:4474398 Salmonella enterica subsp. enterica serovar Paratyphi A str

Start: 4474398, End: 4475063, Length: 666

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a clinical isolate collected from a child with paratyphoid fever in Karachi, Pakistan, 2004. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006511:4465495:447916844791684479833666Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein2e-128457
NC_011294:4560902:457672845767284577381654Salmonella enterica subsp. enterica serovar Enteritidis strThiol:disulfide interchange protein1e-109395
NC_016831:4517850:453387545338754534528654Salmonella enterica subsp. enterica serovar Gallinarum/pullorumThiol:disulfide interchange protein4e-109393
NC_011274:4538722:455454645545464555199654Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91Thiol:disulfide interchange protein4e-109393
NC_011205:4718239:473406547340654734718654Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein4e-109393
NC_016832:4649432:466329046632904663706417Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Thiol:disulfide interchange protein1e-75282
NC_011080:4543000:456151345615134562172660Salmonella enterica subsp. enterica serovar Newport str. SL254,thiol:disulfide interchange protein DsbA7e-47186
NC_013971:2876733:288418528841852884832648Erwinia amylovora ATCC 49946 chromosome, complete genomethiol:disulfide interchange protein2e-35149
NC_010694:2971170:297878329787832979430648Erwinia tasmaniensis, complete genomeThiol:disulfide interchange protein DsbA3e-33141
NC_020064:3998715:406321140632114063831621Serratia marcescens FGI94, complete genomeprotein-disulfide isomerase4e-31134
NC_014618:1040381:104546710454671046090624Enterobacter cloacae SCF1 chromosome, complete genomeDSBA oxidoreductase5e-29127
NC_012913:1867276:186727618672761867893618Aggregatibacter aphrophilus NJ8700, complete genomethiol:disulfide interchange protein DsbA1e-28125
NC_016513:317197:337725337725338342618Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completethiol:disulfide interchange protein DsbA2e-27122
NC_009092:261778:283924283924284535612Shewanella loihica PV-4, complete genomeDSBA oxidoreductase6e-1684.3
NC_004347:4007847:401702740170274017638612Shewanella oneidensis MR-1, complete genomethiol:disulfide interchange protein, DsbA family4e-1065.1