Pre_GI: BLASTP Hits

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Query: NC_011146:4070000:4075651 Geobacter bemidjiensis Bem, complete genome

Start: 4075651, End: 4076070, Length: 420

Host Lineage: Geobacter bemidjiensis; Geobacter; Geobacteraceae; Desulfuromonadales; Proteobacteria; Bacteria

General Information: Geobacter bemidjiensis Bem (ATCC BAA-1014, DSM 16622) was isolated from subsurface sediments collected in Bemidji, Minnesota, USA. This organism, like other Geobacter species, is capable of oxidizing organic compounds and coupling that to reduction of metals.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015680:369777:385309385309385725417Pyrococcus yayanosii CH1 chromosome, complete genometranscription nickel responsive regulator (nikR)7e-37152
NC_000868:1386592:139771213977121398128417Pyrococcus abyssi GE5, complete genomenickel responsive regulator1e-34145
NC_019942:987134:103530410353041035708405Aciduliprofundum sp. MAR08-339, complete genomeputative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain1e-26118
NC_013156:728397:748013748013748438426Methanocaldococcus fervens AG86, complete genometranscriptional regulator NikR, CopG family3e-24110
NC_000909:467607:485578485578486003426Methanocaldococcus jannaschii DSM 2661, complete genomenickel responsive regulator3e-24110
NC_015416:2113949:213483821348382135245408Methanosaeta concilii GP-6 chromosome, complete genomeCopG family transcriptional regulator7e-24109
NC_019940:3089884:310346431034643103886423Thioflavicoccus mobilis 8321 chromosome, complete genometranscriptional regulator1e-23108
NC_019978:315346:320567320567320980414Halobacteroides halobius DSM 5150, complete genomeputative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain3e-21100
NC_013508:275081:292753292753293199447Edwardsiella tarda EIB202, complete genomenickel responsive regulator3e-21100
NC_012779:261438:275788275788276225438Edwardsiella ictaluri 93-146, complete genomenickel-responsive transcriptional regulator NikR, putative6e-2199.4
NC_012912:242709:263936263936264355420Dickeya zeae Ech1591, complete genometranscriptional regulator NikR, CopG family1e-1994.7
NC_004917:340997:341634341634342065432Helicobacter hepaticus ATCC 51449, complete genomenickel responsive regulator1e-1891.3
NC_008340:2272692:228003322800332280452420Alkalilimnicola ehrlichei MLHE-1, complete genomeputative transcriptional regulator, CopG family1e-1788.2
NC_004741:4160500:418449041844904184891402Shigella flexneri 2a str. 2457T, complete genomenickel responsive regulator6e-1786.3
NC_007355:2838952:285914428591442859569426Methanosarcina barkeri str. fusaro chromosome 1, complete sequencetranscriptional regulator, CopG family8e-1785.5
NC_013959:83992:101591101591102100510Sideroxydans lithotrophicus ES-1 chromosome, complete genometranscriptional regulator NikR, CopG family2e-1684
NC_003552:2133590:215101021510102151447438Methanosarcina acetivorans C2A, complete genometranscriptional regulator, CopG family5e-1476.3
NC_010510:310938:327484327484327945462Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeputative transcriptional regulator, CopG family2e-1374.7
NC_007520:1940120:196002519600251960498474Thiomicrospira crunogena XCL-2, complete genomeputative transcriptional regulator, CopG family1e-1168.6
NC_008701:168662:184589184589184987399Pyrobaculum islandicum DSM 4184, complete genomeputative transcriptional regulator, CopG family1e-1065.1
NC_006396:2025500:203044520304452030855411Haloarcula marismortui ATCC 43049 chromosome I, complete sequencetranscriptional regulator CopG family2e-1064.3
NC_008212:2978786:299626729962672996806540Haloquadratum walsbyi DSM 16790, complete genometranscription regulator; probably nickel responsive regulator2e-1064.3
NC_020388:1582817:159309715930971593525429Natronomonas moolapensis 8.8.11 complete genomeNikR family transcription regulator5e-0959.7
NC_016070:167362:187502187502187894393Thermoproteus tenax Kra 1, complete genomeCopG/MetJ family transcriptional regulator2e-0858.2
NC_019974:2421422:243945524394552439892438Natronococcus occultus SP4, complete genomeputative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain4e-0856.6
NC_013887:1383127:138587513858751386282408Methanocaldococcus sp. FS406-22 chromosome, complete genomeputative transcriptional regulator, CopG family7e-0855.8
NC_013964:161105:169317169317169745429Haloferax volcanii DS2 plasmid pHV3, complete sequenceRibbon-helix-helix protein, copG family domain protein4e-0753.5
NC_009635:985935:997499997499997906408Methanococcus aeolicus Nankai-3 chromosome, complete genomeCopG family transcriptional regulator4e-0753.5
NC_006396:1097000:110280211028021103221420Haloarcula marismortui ATCC 43049 chromosome I, complete sequenceputative nickel responsive regulator3e-0650.4