Pre_GI: BLASTP Hits

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Query: NC_011094:593100:600310 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 600310, End: 600546, Length: 237

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:2402893:241142324114232411659237Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein4e-40162
NC_012125:600586:607796607796608032237Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein4e-40162
NC_011149:588895:596105596105596341237Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein4e-40162
NC_016832:2363136:237245023724502372686237Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-39161
NC_011083:654479:661689661689661925237Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein1e-39161
NC_006905:651732:658967658967659185219Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein9e-37152
NC_016856:606742:614019614019614189171Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein1e-26118