Pre_GI: BLASTP Hits

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Query: NC_011094:334267:341337 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 341337, End: 341516, Length: 180

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011205:329155:344014344014344256243Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein2e-28124
NC_006905:326517:335030335030335344315Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein4e-27119
NC_012125:326909:334900334900335142243Salmonella enterica subsp. enterica serovar Paratyphi C straincytoplasmic protein5e-27119
NC_006511:2540500:256570325657032566017315Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein6e-2199.4
NC_003198:331314:339851339851340156306Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein3e-1787
NC_016832:2612809:263792926379292638162234Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein4e-1786.7
NC_016514:506611:530199530199530657459Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein3e-1373.9
NC_014121:677799:696780696780697235456Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein5e-1372.8
NC_015968:511282:528718528718529191474Enterobacter asburiae LF7a chromosome, complete genomehypothetical protein7e-1372.4
NC_016863:332060:340428340428340676249Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein1e-1272
NC_011080:333121:344281344281344457177Salmonella enterica subsp. enterica serovar Newport str. SL254,1e-1271.6
NC_016857:329849:339932339932340045114Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein2e-1271.6
NC_011149:309556:321823321823321936114Salmonella enterica subsp. enterica serovar Agona str. SL483,2e-1271.6
NC_017046:329847:339930339930340121192Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein2e-1271.6
NC_016860:332087:340455340455340646192Salmonella enterica subsp. enterica serovar Typhimurium strputative cytoplasmic protein2e-1271.6
NC_015663:1869000:190067619006761900858183Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein1e-0961.6
NC_011205:329155:337601337601337810210Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein6e-0959.3
NC_016860:332087:34039034039034048293Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-0753.5