Pre_GI: BLASTP Hits

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Query: NC_011094:1584038:1595127 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 1595127, End: 1595459, Length: 333

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:1574057:158418115841811584513333Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein1e-44177
NC_003197:1611302:162744416274441627776333Salmonella typhimurium LT2, complete genomehypothetical protein1e-44177
NC_016810:1576636:158429715842971584629333Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-44177
NC_016856:1621279:163742116374211637753333Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein1e-44177
NC_016857:1576636:158429715842971584629333Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein1e-44177
NC_016860:1614280:162513416251341625466333Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-44177
NC_016863:1575488:158561215856121585944333Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein1e-44177
NC_011149:1578451:158597015859701586185216Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein2e-27120
NC_010634:2004653:201516020151602015486327Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein9e-2199
NC_004631:948054:953913953913954239327Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein6e-1992.8
NC_011205:2180598:222338222233822223708327Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein5e-1992.8
NC_011274:2044000:208750220875022087828327Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein5e-1992.8
NC_011294:2053991:209636920963692096695327Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein5e-1992.8
NC_011094:2061000:206332720633272063653327Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein9e-1992
NC_020260:3355814:337473733747373375063327Cronobacter sakazakii Sp291, complete genomehypothetical protein9e-1992
NC_013282:551219:576480576480576722243Cronobacter turicensis, complete genomehypothetical protein8e-1475.9
NC_020260:3004500:301276730127673013096330Cronobacter sakazakii Sp291, complete genomehypothetical protein1e-1168.6
NC_020064:3157656:317040931704093170702294Serratia marcescens FGI94, complete genomeProtein of unknown function (DUF1493)2e-0651.6