Pre_GI: BLASTP Hits

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Query: NC_011092:9974:11079 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 11079, End: 12167, Length: 1089

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world.This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015968:74124:7412474124752151092Enterobacter asburiae LF7a chromosome, complete genomeputative RecF protein0721
NC_009792:4693152:4697643469764346987311089Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein0686
NC_014562:469154:4719964719964731021107Pantoea vagans C9-1 chromosome, complete genomeDNA replication and repair protein recF2e-118425
NC_014306:1286248:1289814128981412909021089Erwinia billingiae Eb661, complete genomePutative RecF protein1e-115416
NC_013956:1207500:1208892120889212100041113Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein1e-113409
NC_016816:3373950:3386858338685833879641107Pantoea ananatis LMG 5342, complete genomeDNA replication and repair protein RecF5e-113407
NC_010162:8585856:8586669858666985877571089Sorangium cellulosum 'So ce 56', complete genomehypothetical protein2e-72273
NC_014841:248487:2716962716962728591164Pantoea sp. At-9b plasmid pPAT9B04, complete sequenceATPase2e-69263
NC_011283:2836000:285096828509682851420453Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein1e-42174
NC_009767:5464796:5476022547602254771341113Roseiflexus castenholzii DSM 13941, complete genomehypothetical protein1e-21104
NC_014228:3391500:3403198340319834044061209Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein4e-21102
NC_008786:4579490:4587447458744745886461200Verminephrobacter eiseniae EF01-2, complete genomehypothetical protein9e-2098.2
NC_013595:8338619:8362208836220883634371230Streptosporangium roseum DSM 43021, complete genomeATPase-like protein1e-1997.8
NC_007645:3581114:3601492360149236026521161Hahella chejuensis KCTC 2396, complete genomepredicted ATPase3e-1996.3
NC_009337:715500:7411327411327423401209Chlorobium phaeovibrioides DSM 265 chromosome, complete genomehypothetical protein3e-1996.3
NC_011726:2793669:2794142279414227953291188Cyanothece sp. PCC 8801, complete genomehypothetical protein9e-1994.7
NC_015437:438538:4543434543434554281086Selenomonas sputigena ATCC 35185 chromosome, complete genomeSMC domain protein2e-1894
NC_010524:2117347:2132014213201421332881275Leptothrix cholodnii SP-6, complete genomehypothetical protein2e-1893.2
NC_013161:3448966:3466129346612934673161188Cyanothece sp. PCC 8802, complete genomehypothetical protein2e-1893.2
NC_009614:4802000:4817691481769148187791089Bacteroides vulgatus ATCC 8482 chromosome, complete genomehypothetical protein7e-1788.6
NC_014210:2747787:2758446275844627596391194Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,SMC domain protein3e-1583.2
NC_015577:3113907:3141536314153631426841149Treponema azotonutricium ZAS-9 chromosome, complete genomeABC transport protein, ATP-binding subunit3e-1583.2
NC_009441:4384500:4399792439979244008861095Flavobacterium johnsoniae UW101 chromosome, complete genomeATPase-like protein9e-1581.6
NC_009348:2247500:2254235225423522554221188Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein1e-1481.3
NC_014228:3391500:3419252341925234203431092Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein1e-1480.9
NC_013892:3278647:3296381329638132974721092Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-1480.9
NC_012912:4071859:4106325410632541074161092Dickeya zeae Ech1591, complete genomeSMC domain protein2e-1480.1
NC_007643:4294818:4297400429740042985841185Rhodospirillum rubrum ATCC 11170, complete genomehypothetical protein5e-1479
NC_016783:429162:4426014426014440161416Corynebacterium diphtheriae INCA 402 chromosome, complete genomeDNA replication and repair protein recF8e-1478.6
NC_017060:59500:9599795997972831287Rahnella aquatilis HX2 plasmid PRA1, complete sequencehypothetical protein7e-1168.6
NC_014394:942015:9408349408349420181185Gallionella capsiferriformans ES-2 chromosome, complete genomeSMC domain-containing protein3e-1066.2
NC_010424:422029:439948439948440436489Candidatus Desulforudis audaxviator MP104C, complete genome2e-0963.9
NC_016051:1129154:1131745113174511330341290Thermococcus sp. AM4 chromosome, complete genomeRecF/RecN/SMC N terminal domain2e-0757.4
NC_017223:3345902:3356009335600933572201212Bordetella pertussis CS chromosome, complete genomehypothetical protein1e-0654.3
NC_002929:3305682:3315789331578933170001212Bordetella pertussis Tohama I, complete genomehypothetical protein1e-0654.3
NC_008740:637870:6413726413726424841113Marinobacter aquaeolei VT8, complete genomehypothetical protein2e-0653.5
NC_012880:4117376:4122902412290241241521251Dickeya dadantii Ech703, complete genomehypothetical protein9e-0651.6