Pre_GI: BLASTP Hits

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Query: NC_011092:76993:94833 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 94833, End: 95519, Length: 687

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world.This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014500:3097362:315295931529593153642684Dickeya dadantii 3937 chromosome, complete genomeInner membrane protein forms channel for type IV secretion of T-DNA complex (VirB8)4e-56217
NC_012912:1701231:170212117021211702804684Dickeya zeae Ech1591, complete genomeVirB8 family protein8e-56216
NC_016818:1795576:182692518269251827608684Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completetype IV secretory pathway, component VirB83e-54211
NC_011283:1811000:184490318449031845586684Klebsiella pneumoniae 342 chromosome, complete genometype IV secretion system protein VirB82e-53208
NC_013592:2968500:300352430035243004207684Dickeya dadantii Ech586, complete genomeVirB8 family protein6e-42170
NC_009792:859228:878052878052878735684Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-40165
NC_020181:473170:491995491995492678684Enterobacter aerogenes EA1509E, complete genomeInner membrane protein forms channel for type IV secretion of T-DNA complex (VirB8)2e-40165
NC_016845:3448881:347436834743683475051684Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,type IV secretion system VirB8 component6e-40164
NC_012731:3411161:345524534552453455928684Klebsiella pneumoniae NTUH-K2044 chromosome, complete genometype IV secretion system VirB8 component3e-39161
NC_016513:1126263:113193711319371132626690Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completetransport associated protein 86e-1477.8
NC_015593:1587684:160056016005601601348789Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeVirB8 family protein1e-0963.2
NC_014914:127873:147962147962148672711Taylorella equigenitalis MCE9 chromosome, complete genomeInner membraney-like protein3e-0962.4
NC_009254:365812:370362370362371057696Burkholderia vietnamiensis G4 chromosome 3, complete sequenceVirB8 family protein3e-0755.5