Pre_GI: BLASTP Hits

Some Help

Query: NC_011092:76993:93616 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 93616, End: 94623, Length: 1008

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world.This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011283:1811000:1845809184580918468281020Klebsiella pneumoniae 342 chromosome, complete genomeTrbL/VirB6 plasmid conjugal transfer protein2e-61236
NC_016818:1795576:1827831182783118288621032Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completetype IV secretory pathway, VirB6 component3e-59228
NC_014500:3097362:3151710315171031527381029Dickeya dadantii 3937 chromosome, complete genomeIntegral inner membrane protein of type IV secretion complex (VirB6)6e-59228
NC_012912:1701231:1703025170302517040531029Dickeya zeae Ech1591, complete genomeTrbL/VirB6 plasmid conjugal transfer protein7e-58224
NC_013592:2968500:3002246300224630033101065Dickeya dadantii Ech586, complete genomeTrbL/VirB6 plasmid conjugal transfer protein1e-54213
NC_012731:3411161:3453950345395034550291080Klebsiella pneumoniae NTUH-K2044 chromosome, complete genometype IV secretion system VirB6 component3e-53209
NC_020181:473170:4929004929004939731074Enterobacter aerogenes EA1509E, complete genomeIntegral inner membrane protein of type IV secretion complex (VirB6)6e-53207
NC_009792:859228:8789578789578800301074Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein6e-53207
NC_016845:3448881:3473073347307334741461074Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein2e-52206
NC_016513:2103958:2129335212933521303361002Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completetransport associated protein 62e-24113
NC_016513:1126263:113283911328391133777939Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeTriE protein1e-22107