Pre_GI: BLASTP Hits

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Query: NC_011092:76993:92586 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 92586, End: 93302, Length: 717

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world.This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016818:1795576:182922218292221829941720Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeType IV secretion system protein2e-68258
NC_004547:1873390:187339018733901874118729Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative conjugal transfer protein2e-66251
NC_014500:3097362:315074731507473151463717Dickeya dadantii 3937 chromosome, complete genomeMinor pilin of type IV secretion complex (VirB5)3e-66251
NC_011283:1811000:184718718471871847915729Klebsiella pneumoniae 342 chromosome, complete genometype IV secretion system protein1e-65249
NC_012912:1701231:170430017043001705016717Dickeya zeae Ech1591, complete genometype IV secretion system family protein2e-64245
NC_020181:473170:494227494227494934708Enterobacter aerogenes EA1509E, complete genomeMinor pilin of type IV secretion complex, VirB56e-50197
NC_009792:859228:880284880284880991708Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein6e-50197
NC_016845:3448881:347211234721123472819708Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein6e-50197
NC_013592:2968500:300129530012953001999705Dickeya dadantii Ech586, complete genometype IV secretion system family protein5e-50197
NC_012731:3411161:345299734529973453701705Klebsiella pneumoniae NTUH-K2044 chromosome, complete genometype IV secretion system VirB5 component3e-48191
NC_016513:2103958:212835321283532129084732Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completetransport associated protein 41e-2099.8