Pre_GI: BLASTP Hits

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Query: NC_011092:76993:79175 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 79175, End: 79399, Length: 225

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world.This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017171:280762:289900289900290340441Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomehypothetical protein4e-37153
NC_008344:669498:675395675395675619225Nitrosomonas eutropha C91, complete genomehypothetical protein1e-36151
NC_004741:2593012:260193426019342602158225Shigella flexneri 2a str. 2457T, complete genomehypothetical protein1e-36151
NC_008344:2374761:238964123896412389865225Nitrosomonas eutropha C91, complete genomehypothetical protein1e-36151
NC_009651:19909:216132161321777165Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN5,hypothetical protein1e-24111
NC_008782:2683989:268927326892732689470198Acidovorax sp. JS42, complete genomehypothetical protein2e-0857.8