Pre_GI: BLASTP Hits

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Query: NC_011092:76993:103389 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 103389, End: 105296, Length: 1908

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world.This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016818:2836851:2858289285828928601631875Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein0746
NC_011745:2209288:2210612221061222125011890Escherichia coli ED1a chromosome, complete genomeputative MobB mobilization protein0741
NC_014500:3097362:3157741315774131595461806Dickeya dadantii 3937 chromosome, complete genomeMobB protein0736
NC_012731:3411161:3460903346090334627921890Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomemobilization protein0734
NC_016845:3448881:3480058348005834819171860Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative MobB mobilization protein0734
NC_016612:5296076:5298530529853053003891860Klebsiella oxytoca KCTC 1686 chromosome, complete genomemobilization protein0725
NC_016818:1795576:1816591181659118184621872Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein0713
NC_011283:1811000:1838835183883518405711737Klebsiella pneumoniae 342 chromosome, complete genometype IV conjugative transfer system coupling protein TraD3e-170598
NC_009792:859228:8709178709178726711755Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein9e-170597
NC_020181:473170:4848594848594865981740Enterobacter aerogenes EA1509E, complete genomeMobB protein9e-170597
NC_014394:1658357:1667301166730116690671767Gallionella capsiferriformans ES-2 chromosome, complete genomeTriK protein5e-100365
NC_015554:1215401:1228827122882712306741848Alteromonas sp. SN2 chromosome, complete genomeTriK protein2e-28127
NC_015696:285456:2882062882062902062001Francisella sp. TX077308 chromosome, complete genomehypothetical protein2e-0861.2