Pre_GI: BLASTP Hits

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Query: NC_011083:824659:831253 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Start: 831253, End: 831399, Length: 147

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016860:816000:821598821598821819222Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein7e-1062.8
NC_010102:2322866:234109823410982341349252Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein8e-1062.4
NC_016832:2201860:221961222196122219758147Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein8e-1062.4
NC_011080:780850:787454787454787600147Salmonella enterica subsp. enterica serovar Newport str. SL254,putative inner membrane protein8e-1062.4
NC_004631:2205821:222284722228472223182336Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein2e-0961.2
NC_003197:776238:782654782654782989336Salmonella typhimurium LT2, complete genomeputative inner membrane protein2e-0961.2
NC_016810:775649:782065782065782400336Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-0961.2
NC_016856:776735:783151783151783486336Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein2e-0961.2
NC_016857:775649:782065782065782400336Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative inner membrane protein2e-0961.2
NC_016863:776734:783150783150783485336Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein2e-0961.2
NC_003198:751779:757913757913758248336Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-0961.2