Pre_GI: BLASTP Hits

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Query: NC_011083:4466634:4473158 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Start: 4473158, End: 4473298, Length: 141

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011080:4461851:446837544683754468515141Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein7e-1889.4
NC_016857:4491976:449850044985004498640141Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein2e-1787.8
NC_016832:4288980:429551642955164295656141Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-1787.8
NC_010102:4396500:440316344031634403303141Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1787.8
NC_011149:4390315:439683943968394396979141Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein9e-1682
NC_011094:4361238:436776243677624367902141Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein3e-1580.9
NC_016831:4286000:429268642926864292826141Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein3e-1580.5
NC_011205:4486142:449266644926664492806141Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein5e-1579.7