Pre_GI: BLASTP Hits

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Query: NC_011083:403022:402562 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Start: 402562, End: 403062, Length: 501

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011205:645591:645131645131645631501Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853Gp41e-94345
NC_016860:397138:397138397138397638501Salmonella enterica subsp. enterica serovar Typhimurium strgp42e-94343
NC_010067:2529750:257122625712262571726501Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-90330
NC_011740:2072173:209156720915672092178612Escherichia fergusonii ATCC 35469, complete genomeputative DNA stabilization protein GP46e-50196
CP002185:2608000:263033626303362630836501Escherichia coli W, complete genomeputative DNA stabilization protein4e-49193
NC_020418:3102460:312066031206603121157498Morganella morganii subsp. morganii KT, complete genomehypothetical protein1e-48191
NC_011748:2655989:268140326814032681885483Escherichia coli 55989, complete genomeputative packaged DNA stabilization protein p274e-22103
CU928145:2655989:268140326814032681885483Escherichia coli 55989 chromosome, complete genomeputative packaged DNA stabilization protein p274e-22103
NC_013364:2612822:263062426306242631085462Escherichia coli O111:H- str. 11128, complete genomeputative head DNA stabilization protein3e-1994.4
NC_011742:2489000:250939625093962509857462Escherichia coli S88 chromosome, complete genomeDNA stabilization protein from phage3e-1994.4
NC_008563:2565876:258629925862992586760462Escherichia coli APEC O1, complete genomeputative DNA stabilization protein3e-1994.4
NC_007946:2593500:261307326130732613534462Escherichia coli UTI89, complete genomehypothetical protein3e-1994.4