Pre_GI: BLASTP Hits

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Query: NC_011083:374000:384655 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Start: 384655, End: 385206, Length: 552

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:2496808:251463225146322515219588Salmonella enterica subsp. enterica serovar Paratyphi A strsuperinfection exclusion8e-88322
NC_006511:2501500:251909625190962519683588Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCsuperinfection exclusion8e-88322
NC_016860:364981:376518376518377105588Salmonella enterica subsp. enterica serovar Typhimurium strsuperinfection exclusion protein B2e-84311
NC_011751:1405381:141681614168161417397582Escherichia coli UMN026 chromosome, complete genomeSuperinfection exclusion protein B1e-77288
NC_011742:1177946:118860511886051189186582Escherichia coli S88 chromosome, complete genomeSuperinfection exclusion protein B5e-76283
NC_007946:1239278:124762912476291248210582Escherichia coli UTI89, complete genomeputative superinfection exclusion protein B of prophage5e-76283
NC_008563:1175035:118501711850171185598582Escherichia coli APEC O1, complete genomeputative superinfection exclusion protein B of prophage5e-76283
NC_004431:1401681:140977414097741410355582Escherichia coli CFT073, complete genomePutative superinfection exclusion protein B of prophage2e-75281