Pre_GI: BLASTP Hits

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Query: NC_010674:192951:209394 Clostridium botulinum B str. Eklund 17B, complete genome

Start: 209394, End: 210071, Length: 678

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium botulinum B str. Eklund 17B is a nonproteolytic botulism neurotoxin B strain. This strain was isolated from marine sediments taken off the coast of Washington, USA and was not associated with botulism. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin.Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium. Honey is the most common vehicle for infection in infants. Food poisoning through C. botulinum is the most frequent type of infection caused by this bacterium. The wound botulism that occurs when C. botulinum infects an individual via an open wound is much rarer and is very similar to tetanus disease. There are several types of botulinum toxin known (type A through type F), all of them being neurotoxic polypeptides. The most common and widely distributed are strains and serovars of C. botulinum that produce type A toxin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010723:173280:211211211211211888678Clostridium botulinum E3 str. Alaska E43, complete genomethymidylate kinase2e-127454
NC_014328:85290:141771141771142454684Clostridium ljungdahlii ATCC 49587 chromosome, complete genomethymidylate kinase3e-81301
NC_013316:4018451:402266440226644023368705Clostridium difficile R20291, complete genomeputative thymidylate kinase3e-76284
NC_009089:4140764:414425041442504144939690Clostridium difficile 630, complete genomeputative thymidylate kinase3e-76284
NC_019978:39000:577165771658384669Halobacteroides halobius DSM 5150, complete genomethymidylate kinase4e-68257
NC_008596:1933836:194975319497531950385633Mycobacterium smegmatis str. MC2 155, complete genomethymidylate kinase3e-1375.1
NC_003450:788000:790096790096790707612Corynebacterium glutamicum ATCC 13032, complete genomethymidylate kinase4e-0961.6
NC_000961:1481685:148976714897671490384618Pyrococcus horikoshii OT3, complete genomethymidylate kinase2e-0756.2
NC_007333:3244572:3264417326441732664772061Thermobifida fusca YX, complete genomethymidylate kinase2e-0652.8
NC_000917:40111:628996289963489591Archaeoglobus fulgidus DSM 4304, complete genomethymidylate kinase (tmk)4e-0651.6