Pre_GI: BLASTP Hits

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Query: NC_010612:6385520:6399632 Mycobacterium marinum M, complete genome

Start: 6399632, End: 6400312, Length: 681

Host Lineage: Mycobacterium marinum; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium marinum is commonly found in fresh and salt water in North America. This bacterium, a close relative of M. tuberculosis, causes a tuberculosis-like disease in frogs, fish and other cold-blooded animals, and a peripheral granulomatous disease in humans. Human infections can be persistent and may lead to systemic infection and arthritis. M. marinum is photochromogenic, i.e. it produces bright yellow pigmentation (mainly beta-carotene) upon exposure to visible light. Infection is followed by a 2-8 week incubation period resulting in suppuration (pus) and organized ulcerating granulomas (tumorous lesions), predominantly localized in lymphatic and tendon sheaths, and cooler body tissues in the extremities.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020133:5965500:596795059679505968630681Mycobacterium liflandii 128FXT, complete genomeosmoprotectant (glycine betaine/carnitine/choline/L-proline) transport integral membrane protein ABC transporter ProW2e-100364
NC_008595:312861:312178312178312864687Mycobacterium avium 104, complete genomeABC transporter, permease protein1e-69262
NC_002944:292974:292974292974293660687Mycobacterium avium subsp. paratuberculosis K-10, complete genomeProW2e-69261
NC_014643:1251847:126919912691991269891693Rothia dentocariosa ATCC 17931 chromosome, complete genomeglycine ABC transporter permease2e-26119
NC_008148:583030:608239608239608946708Rubrobacter xylanophilus DSM 9941, complete genomebinding-protein-dependent transport systems inner membrane component3e-1478.6
NC_014479:3245126:326511132651113265764654Bacillus subtilis subsp. spizizenii str. W23 chromosome, completecholine ABC transporter permease1e-1273.2
NC_014209:1580423:159879915987991599437639Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,binding-protein-dependent transport systems inner membrane component1e-1170.1
NC_016047:3406488:342286934228693423522654Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completecholine transport system permease opuBB2e-1169.7
NC_009792:2688747:271069327106932711316624Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-1169.7
NC_009778:1070000:1070004107000410711371134Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein6e-1167.8
NC_020260:1111130:1112092111209211132251134Cronobacter sakazakii Sp291, complete genomeosmoprotectant uptake system permease YehY6e-1167.8
NC_009727:1899876:1899876189987619014561581Coxiella burnetii Dugway 7E9-12, complete genomeABC transporter, quaternary amine uptake transporter (QAT) family, permease/periplasmic amine-binding protein8e-1167.4
NC_004461:205068:213697213697214332636Staphylococcus epidermidis ATCC 12228, complete genomeopuCB protein1e-1066.6
NC_014315:2711852:2731698273169827332031506Nitrosococcus watsoni C-113 chromosome, complete genomeglycine betaine ABC transporter substrate-binding protein9e-1063.9
NC_013520:1905554:1927618192761819291501533Veillonella parvula DSM 2008, complete genomeSubstrate-binding region of ABC-type glycine betaine transport system3e-0962.4
NC_014121:2247913:226518222651822265829648Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative osmoprotectant transport system permease protein4e-0961.6
NC_011999:1567818:158318915831891583833645Macrococcus caseolyticus JCSC5402, complete genomeglycine betaine/carnitine/choline ABC transporter, permease protein5e-0961.2
NC_014614:6115:392333923339889657Clostridium sticklandii, complete genomeGlycine betaine transport system permease protein / Glycine betaine-binding protein (fragment)5e-0961.2
NC_013406:5066769:510984751098475110548702Paenibacillus sp. Y412MC10 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component9e-0960.5
NC_009925:647752:652404652404653033630Acaryochloris marina MBIC11017, complete genomebinding-protein-dependent inner membrane transport system, putative1e-0860.1
NC_012526:4462:2070020700218811182Deinococcus deserti VCD115, complete genomeputative proline/glycine betaine5e-0858.2
NC_009328:293000:312108312108312737630Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeglycine betaine/L-proline ABC transporter permease7e-0857.4
NC_016605:50695:6941669416709451530Pediococcus claussenii ATCC BAA-344 chromosome, complete genomesubstrate binding domain of ABC-type glycine betaine transport system family protein7e-0857.4
NC_018515:4196409:422204142220414222697657Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeproline/glycine betaine ABC transporter permease1e-0756.6
NC_014479:3245126:326349132634913264162672Bacillus subtilis subsp. spizizenii str. W23 chromosome, completecholine ABC transporter permease1e-0756.6
NC_013406:5066769:510821851082185108883666Paenibacillus sp. Y412MC10 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component2e-0756.2
NC_006510:310212:341910341910342539630Geobacillus kaustophilus HTA426, complete genomehypothetical protein2e-0756.2
NC_016593:353505:379641379641380270630Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completebinding-protein-dependent transport system inner membrane component2e-0756.2
NC_016023:1143130:1143130114313011446591530Bacillus coagulans 36D1 chromosome, complete genomeglycine betaine ABC transporter periplasmic protein2e-0756.2
NC_014915:308056:325858325858326487630Geobacillus sp. Y412MC52 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component2e-0755.8
NC_013411:1168049:118585111858511186480630Geobacillus sp. Y412MC61, complete genomebinding-protein-dependent transport systems inner membrane component2e-0755.8
NC_015589:3241364:324228832422883242905618Desulfotomaculum ruminis DSM 2154 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component3e-0755.1
NC_016047:3406488:342124934212493421920672Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completecholine transport system permease opuBD6e-0754.3
NC_007576:1854136:1854136185413618556621527Lactobacillus sakei subsp. sakei 23K, complete genomePutative glycine/betaine/carnitine/choline ABC transporter, substrate binding and membrane-spanning subunits6e-0754.3
NC_002678:6061448:6061448606144860634271980Mesorhizobium loti MAFF303099, complete genomeABC transporter permease protein1e-0653.5
NC_016626:400080:403660403660404385726Burkholderia sp. YI23 plasmid byi_1p, complete sequencebinding-protein-dependent transport system inner membrane protein2e-0652.8
NC_011999:1567818:158473315847331585425693Macrococcus caseolyticus JCSC5402, complete genomeglycine betaine/carnitine/choline ABC transporter, permease protein5e-0651.6
NC_009381:1783886:1821090182109018222441155Yersinia pestis Pestoides F chromosome, complete genomeglycine betaine transporter membrane protein7e-0650.8
NC_014479:3245126:326906732690673269741675Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeglycine betaine/carnitine/choline/choline sulfate ABC transporter permease8e-0650.8