Pre_GI: BLASTP Hits

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Query: NC_010572:8493946:8513912 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 8513912, End: 8515318, Length: 1407

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010572:1:3061230612320181407Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein0853
NC_013947:2113941:2119465211946521208471383Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehypothetical protein2e-34147
NC_021177:2766910:2776208277620827776231416Streptomyces fulvissimus DSM 40593, complete genomeRegulatory protein3e-33143
NC_015953:2603526:2615032261503226163811350Streptomyces sp. SirexAA-E chromosome, complete genomeregulatory protein2e-31137
NC_015952:171707:1798651798651812321368Streptomyces violaceusniger Tu 4113 plasmid pSTRVI02, completehypothetical protein6e-25115
NC_019673:3607958:3623663362366336250211359Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein7e-24112
NC_003888:7706226:7710446771044677119511506Streptomyces coelicolor A3(2), complete genomehypothetical protein4e-1789.7
NC_009953:1364500:1372286137228613736471362Salinispora arenicola CNS-205 chromosome, complete genomeregulator4e-1273.2
NC_013595:9149273:9160210916021091615681359Streptosporangium roseum DSM 43021, complete genomehypothetical protein3e-1067
NC_016109:2629301:2643968264396826449781011Kitasatospora setae KM-6054, complete genomehypothetical protein4e-1066.6
NC_016111:4207110:4211872421187242132271356Streptomyces cattleya NRRL 8057, complete genomehypothetical protein4e-1066.2
NC_014210:5309121:5321294532129453226371344Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,hypothetical protein1e-0964.7
NC_018750:5293829:5305786530578653071411356Streptomyces venezuelae ATCC 10712, complete genomeputative C1 regulatory protein4e-0963.2
NC_013093:1213908:1229350122935012307561407Actinosynnema mirum DSM 43827, complete genomehypothetical protein4e-0859.7
NC_013510:4484000:449080744908074491247441Thermomonospora curvata DSM 43183, complete genomehypothetical protein1e-0758.5
NC_017186:9604427:9620650962065096219781329Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein3e-0757
NC_014318:9604367:9620590962059096219181329Amycolatopsis mediterranei U32 chromosome, complete genomehypothetical protein3e-0757
NC_016109:62000:652736527365824552Kitasatospora setae KM-6054, complete genomehypothetical protein5e-0756.2
NC_013929:5927935:5942582594258259439581377Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein4e-0756.2
NC_016111:3577572:3593545359354535949361392Streptomyces cattleya NRRL 8057, complete genomehypothetical protein3e-0653.5
NC_019673:8799533:8816690881669088181051416Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein3e-0653.5
NC_016582:3268857:3276925327692532782741350Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein4e-0653.1
NC_016582:6999074:7021722702172270231551434Streptomyces bingchenggensis BCW-1 chromosome, complete genomesporulation associated protein7e-0652.4